Human Gene ADGRV1 (uc003kjt.4)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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MalaCards Disease Associations
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MalaCards Gene Search: ADGRV1
Diseases sorted by gene-association score: usher syndrome, type 2c* (1327), febrile seizures, familial, 4* (1069), usher syndrome type 2* (224), usher syndrome (30), cervical neuroblastoma (16), extracranial neuroblastoma (16), febrile seizures (15), deafness, autosomal recessive 6 (12), generalized epilepsy with febrile seizures plus* (11), extragonadal seminoma (9), deafness, autosomal recessive 98 (8), usher syndrome, type 2d (8), usher syndrome, type 3a (7), usher syndrome, type 1b (7), usher syndrome, type 1d (6), clear cell ependymoma (6), retinitis pigmentosa (3), nonsyndromic deafness (1) * = Manually curated disease association
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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AF435925 - Homo sapiens very large G protein-coupled receptor 1b (VLGR1) mRNA, complete cds. AF055084 - Homo sapiens very large G-protein coupled receptor-1 (VLGR1) mRNA, complete cds. AK024416 - Homo sapiens cDNA FLJ14354 fis, clone Y79AA1001384, highly similar to Monogenic audiogenic seizure susceptibility protein 1 homolog precursor. AB014586 - Homo sapiens mRNA for KIAA0686 protein, partial cds. BC172212 - Synthetic construct Homo sapiens clone IMAGE:9094358 G protein-coupled receptor 98 precursor (GPR98) gene, partial cds. BC172199 - Synthetic construct Homo sapiens clone IMAGE:9094289 G protein-coupled receptor 98 precursor (GPR98) gene, partial cds. BC172219 - Synthetic construct Homo sapiens clone IMAGE:9094300 G protein-coupled receptor 98 precursor (GPR98) gene, partial cds. AL136541 - Homo sapiens mRNA; cDNA DKFZp761P0710 (from clone DKFZp761P0710). BC172210 - Synthetic construct Homo sapiens clone IMAGE:9094354 G protein-coupled receptor 98 precursor (GPR98) gene, partial cds. BC034748 - Homo sapiens G protein-coupled receptor 98, mRNA (cDNA clone IMAGE:5183306), with apparent retained intron. JD206042 - Sequence 187066 from Patent EP1572962. BC172200 - Synthetic construct Homo sapiens clone IMAGE:9094290 G protein-coupled receptor 98 precursor (GPR98) gene, partial cds. AB075823 - Homo sapiens mRNA for KIAA1943 protein. AL133041 - Homo sapiens mRNA; cDNA DKFZp434L2050 (from clone DKFZp434L2050). BC172211 - Synthetic construct Homo sapiens clone IMAGE:9094356 G protein-coupled receptor 98 precursor (GPR98) gene, partial cds. JD288327 - Sequence 269351 from Patent EP1572962.
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Other Names for This Gene
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Alternate Gene Symbols: GPR98, NR_003149, uc003kjt.3 UCSC ID: uc003kjt.4 RefSeq Accession: NR_003149
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GeneReviews for This Gene
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GeneReviews article(s) related to gene ADGRV1: usher2 (Usher Syndrome Type II)
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Gene Model Information
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category:
| nearCoding
| nonsense-mediated-decay:
| yes
| RNA accession:
| NR_003149.1
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exon count:
| 90 | CDS single in 3' UTR:
| no
| RNA size:
| 19250 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 13341.00 | frame shift in genome:
| no
| % Coverage:
| 100.00 |
has start codon:
| yes
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| yes
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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