S. cerevisiae Gene YHR192W (YHR192W)
  Description: Putative protein of unknown function green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and is induced in response to the DNA-damaging agent MMS
Transcript (Including UTRs)
   Position: sacCer3 chrVIII:486,826-487,662 Size: 837 Total Exon Count: 1 Strand: +
Coding Region
   Position: sacCer3 chrVIII:486,826-487,662 Size: 837 Coding Exon Count: 1 

Page IndexSequence and LinksUniProtKB CommentsPrimersProtein StructureOther Species
GO AnnotationsOther NamesMethods
Data last updated at UCSC: 2011-08-29

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chrVIII:486,826-487,662)mRNAProtein (278 aa)
Gene SorterGenome BrowserOther Species FASTAAlphaFoldSGDUniProtKB

-  Comments and Description Text from UniProtKB
  ID: YHZ2_YEAST
DESCRIPTION: RecName: Full=Uncharacterized membrane protein YHR192W;
SUBCELLULAR LOCATION: Membrane; Multi-pass membrane protein.
MISCELLANEOUS: Present with 3390 molecules/cell in log phase SD medium.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR019273 - DUF2296

Pfam Domains:
PF10058 - Predicted integral membrane zinc-ribbon metal-binding protein

ModBase Predicted Comparative 3D Structure on P38878
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanMouseRatZebrafishD. melanogasterC. elegans
No orthologNo orthologNo orthologNo orthologNo orthologGenome Browser
     Gene Details
     Gene Sorter
     WormBase
     Protein Sequence
     Alignment

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0003674 molecular_function
GO:0046872 metal ion binding

Biological Process:
GO:0034976 response to endoplasmic reticulum stress
GO:0071786 endoplasmic reticulum tubular network organization

Cellular Component:
GO:0005783 endoplasmic reticulum
GO:0005789 endoplasmic reticulum membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0071782 endoplasmic reticulum tubular network


-  Other Names for This Gene
  UCSC ID: YHR192W
Protein: P38878 (aka YHZ2_YEAST)

-  SGD Genes Methods, Credits, and Data Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.