Gene interactions and pathways from curated databases and text-mining
Science 2012, PMID: 22923433

Genome sequencing identifies a basis for everolimus sensitivity.

Iyer, Gopa; Hanrahan, Aphrothiti J; Milowsky, Matthew I; Al-Ahmadie, Hikmat; Scott, Sasinya N; Janakiraman, Manickam; Pirun, Mono; Sander, Chris; Socci, Nicholas D; Ostrovnaya, Irina; Viale, Agnes; Heguy, Adriana; Peng, Luke; Chan, Timothy A; Bochner, Bernard; Bajorin, Dean F; Berger, Michael F; Taylor, Barry S; Solit, David B

Cancer drugs often induce dramatic responses in a small minority of patients. We used whole-genome sequencing to investigate the genetic basis of a durable remission of metastatic bladder cancer in a patient treated with everolimus, a drug that inhibits the mTOR (mammalian target of rapamycin) signaling pathway. Among the somatic mutations was a loss-of-function mutation in TSC1 (tuberous sclerosis complex 1), a regulator of mTOR pathway activation. Targeted sequencing revealed TSC1 mutations in about 8% of 109 additional bladder cancers examined, and TSC1 mutation correlated with everolimus sensitivity. These results demonstrate the feasibility of using whole-genome sequencing in the clinical setting to identify previously occult biomarkers of drug sensitivity that can aid in the identification of patients most likely to respond to targeted anticancer drugs.

Diseases/Pathways annotated by Medline MESH: Neoplasm Metastasis, Urinary Bladder Neoplasms
Document information provided by NCBI PubMed

Text Mining Data

mTOR — TSC1: " Among the somatic mutations was a loss-of-function mutation in TSC1 ( tuberous sclerosis complex 1 ), a regulator of mTOR pathway activation "

Manually curated Databases

No curated data.