Gene interactions and pathways from curated databases and text-mining
SOX2: top 25 interacting genes (chr3:181429711-181432223)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only SOX2-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-SOX2 interactions     Show top Genes on graph    

Less-frequently mentioned interactions with SOX2, not among the Top 25
Other genes interacting with SOX2. Mouse-over to show number of abstracts or databases. Sorted alphabetically (sort by article count).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

ABT1 ACTL6A AHCYL1 AHR AJUBA AKAP11 ALX1
ALX4 AMH AMOTL2 ANAPC1 ANAPC2 ANAPC4 ANAPC5
ANAPC7 ANKRD1 ANP32A ANP32B ANP32E APEX1 ARHGAP1
ARID1A ARID3A ARID3B ARID5A ARID5B ARMC8 ARNTL
ARNTL2 ASCC3 ASCL3 ATF4 ATF5 ATF6 ATF7IP
ATOH1 ATP5A1 BAG2 BAG3 BAG5 BARX2 BAZ2B
BHLHE22 BMI1 BOD1L1 BRD8 BRINP1 BRIP1 BRIX1
BSX C1QBP CALR CAPN2 CASC5 CBX2 CBX4
CCAR2 CCNT1 CDC23 CDC26 CDC73 CDK1 CDK11A
CDK2 CDX1 CDX2 CDX4 CEBPA CHAF1B CHD3
CHD4 CHD6 CHD7 CHD8 CHD9 CLOCK CNOT3
CNP COPS3 CORO1B CPSF3L CREB3L4 CREBBP CREG1
CRX CSNK2A2 CTBP1 CTBP2 CTNNB1 CTNND1 CTR9
CUL7 CUL9 CUX1 CYR61 DAP3 DCT DDX39A
DKFZp686M216 DKK1 DLX5 DMBX1 DNAJA1 DNAJA2 DNAJB6
DNM1L DOCK7 E2F1 E2F2 E2F4 E2F5 E2F6
E2F8 EGR3 EHMT2 EN1 ENOX2 EP300 EP400
EPAS1 EPS8 ETS1 ETV3 ETV6 EYA3 FAM21B
FERMT2 FGF2 FGF3 FGF9 FIGLA FOXA2 FOXC1
FOXE3 FOXF1 FOXF2 FOXH1 FOXK2 FOXM1 FOXP1
FOXP4 FZR1 GATA6 GATAD2A GATAD2B GCM1 GCN1L1
GFI1B GID8 GLI3 GLIS3 GPC4 GPN1 GSC
HAND2 HBP1 HCLS1 HDAC3 HES6 HESX1 HLTF
HMG20A HMGA1 HNRNPA1 HOXA10 HOXA5 HOXB13 HOXD12
HSD17B10 HSPB1 ID1 ILK IMPDH2 INTS1 INTS2
INTS3 INTS7 INTS9 IPO4 IPO5 IPO7 IQGAP3
IRF2BP1 JUND KAT5 KCMF1 KCTD5 KDM6A KDM6B
KPNA4 LARP1 LAS1L LBX1 LDB1 LEF1 LEFTY1
LEFTY2 LEO1 LGALS3BP LMO2 LMO4 LONP1 LOX
LSM2 LSM3 LSM6 MACF1 MAEA MAFB MAGEC1
MAGEC2 MAGED2 MAX MBD2 MBD3 MDN1 MECOM
MECP2 MED22 MED23 MED27 MEF2B MEIS1 MEIS2
MEPCE MFAP1 MGA MIER1 MINA MKLN1 MLF2
MLXIPL MMS19 MRPL1 MRPL12 MRPL15 MRPL39 MRPL4
MRPL41 MRPL9 MRPS22 MRPS26 MRPS35 MRPS9 MSC
MSI2 MSL1 MSL3 MSX1 MSX2 MTA1 MTA2
MTA3 MUC5AC MYC MYEF2 MYOD1 MYOG NAA16
NAA38 NAP1L4 NCAPD2 NCOR1 NCOR2 NEUROD1 NFATC2
NFIB NFYA NHLH2 NIP7 NKX2-1 NKX2-2 NKX2-5
NOL9 NOM1 NPAS4 NR2E3 NR4A3 NRL NUP214
NUP93 OLA1 ONECUT1 ONECUT3 OSBPL11 PAF1 PAPD4
PARP1 PARVA PATZ1 PBX1 PBX2 PDLIM1 PELP1
PFKP PHC2 PHC3 PIAS1 PMF1 POLR2C POP1
POU2F3 POU3F1 POU3F2 PPIH PPP2R5C PPP2R5D PPP6R1
PRDM14 PRKAR1A PRKAR2B PRKDC PROP1 PRPF4 PTF1A
PUS1 PWP1 QSER1 RAD23B RAE1 RALY RANBP10
RANBP9 RANGAP1 RARG RBBP4 RBBP7 RBL1 RBL2
RBM15 RBM4 RBM7 RCOR2 REL RFX1 RFX3
RFX4 RMND5A RMND5B RNGTT RNH1 RPP30 RUNX1
RUVBL1 RUVBL2 SALL1 SALL2 SALL3 SAMD4B SAP130
SART3 SCFD1 SCX SCYL2 SEC16A SENP3 SEPSECS
SET SETD2 SFPQ SGOL2 SHCBP1 SHH SIN3A
SIN3B SIX1 SIX3 SKI SKIV2L2 SLFN11 SLFN5
SMAD2 SMAD3 SMAD6 SMAD7 SMAD9 SMARCA2 SMARCA5
SMARCB1 SMARCC1 SMARCC2 SMARCD1 SMC2 SMC3 SMG6
SNAI3 SNAPC1 SNAPC3 SOX17 SOX21 SOX3 SOX4
SOX7 SP2 SPEN SRA1 SRP54 SRP68 SRP72
SRSF4 SSB SUB1 SUGP2 SUPT16H SUPT5H TAF2
TAF6L TAL1 TBL1XR1 TBP TBX3 TBX5 TCF12
TCF15 TCF19 TCF20 TCF21 TCF23 TCF24 TCF25
TCF3 TCF4 TCF7 TCF7L2 TEAD1 TEAD2 TEAD4
TEX10 TFAP2D TFDP1 TFDP3 TFEB THBS1 TIA1
TIAL1 TNPO1 TNPO3 TNRC18 TP53 TP73 TRERF1
TRIM22 TRIM26 TRIM33 TRRAP TSHZ3 TSPYL1 TUBA1A
TUBA4A TUBB2A TUBB3 TUBB8 TUBG1 TUT1 TWIST1
UBP1 UBR4 UBR5 USP15 USP24 USP34 USP7
USP9X UTP14A VPRBP VPS33A VWA9 WDR26 WDR3
WNT1 WNT11 WNT16 WNT2 WNT3 WNT4 WNT6
WWTR1 XPO1 XPO4 XPO5 XRCC5 XRCC6 YPEL5
YWHAZ YY1 ZBTB10 ZBTB5 ZBTB7A ZCCHC8 ZDBF2
ZEB1 ZEB2 ZFHX3 ZFHX4 ZFP42 ZMYM2 ZMYND8
ZNF24 ZNF281 ZNF384 ZNF462 ZNF536 ZNF609 ZNF644
ZNF687 ZNF787 ZSCAN10
Data information
Please see the Gene Interactions Track Manual.