Gene interactions and pathways from curated databases and text-mining
HMGB1: top 25 interacting genes (chr13:31032878-31040081)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only HMGB1-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-HMGB1 interactions     Show top Genes on graph    

Less-frequently mentioned interactions with HMGB1, not among the Top 25
Other genes interacting with HMGB1. Mouse-over to show number of abstracts or databases. Sorted alphabetically (sort by article count).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

AARS ABCE1 ABCF1 ACACA ACAT1 ACLY ACO2
ACOT13 ACSM3 ACTB ACTBL2 ACTN4 ACTR2 ACTR3
AES AFP AGER AGFG1 AHNAK AHSA1 AIMP2
AK2 AKR1C1 AKT1 AKT2 AKT3 ALDH18A1 ALDH1B1
ALDOA ALYREF ANKHD1 ANP32B ANXA1 ANXA2 AP2A1
AP2A2 AP2B1 AP2M1 AP2S1 APEX1 APOBEC3C APOE
APRT AR ARCN1 ARF5 ARF6 ARHGEF1 ARID1A
ARL2 ARPC3 ARPC4 ASNS ATOH1 ATP5A1 ATP5B
ATP5C1 ATP5O ATP6V1B2 BAG2 BAG6 BLVRB BMP2K
BOLA2 BOLA2B BROX BYSL BZW2 C14orf1 C14orf166
C1QBP CACYBP CALML3 CAMK4 CAND1 CAP1 CAPRIN1
CAPZA1 CAPZB CASP1 CASP10 CASP14 CASP16 CASP4
CASP5 CASP6 CASP7 CASP8 CCAR1 CCL2 CCND1
CCT2 CCT4 CCT5 CD14 CD4 CD86 CDK1
CEBPB CELF2 CEP350 CHD4 CKAP5 CLIC2 CLIC5
CLNS1A CLTB CLTC CNBP CNN2 CNOT1 COASY
COMT COPA COPB1 COPE CORO1B CORO1C CPNE1
CPSF6 CPSF7 CREB1 CREBBP CRK CRKL CRMP1
CRP CSF2 CSNK1A1 CSNK2A1 CSNK2A2 CSNK2B CTCF
CTSD CTSH CUX1 CWC27 CYCS DAB2 DBN1
DDX1 DDX18 DDX42 DDX47 DDX6 DFFB DHX15
DHX16 DHX30 DIAPH1 DIMT1 DLD DNAJB1 DNAJC8
DNM2 DNMT1 DPP4 DYNC1H1 E2F2 EDC4 EEF1B2
EEF1E1 EEF2 EFTUD2 EIF2AK2 EIF2S2 EIF2S3 EIF3B
EIF3C EIF3F EIF3K EIF4A1 EIF4A3 EIF4B EIF4H
EIF5 EIF5B ELAVL1 EMD EMG1 ENO1 EPB41
EPN1 EPS15 EPS15L1 ERF ERLIN1 ERLIN2 ESD
ESYT1 ESYT2 ETS1 FARSB FAU FDFT1 FEN1
FERMT3 FKBP4 FLNA FLNB FLNC FLOT1 FLOT2
FN1 FOXA3 FOXC1 FUS G6PD GALE GALK1
GANAB GAPDH GAR1 GART GCN1L1 GDI2 GLRX3
GLUD1 GMPS GNAI3 GNB1L GOLGA7 GP1BB GSTK1
GSTO1 GSTP1 GTF2A1 GTF2B GTF2E1 GTF2F1 GTF2F2
GTF3A GTPBP4 H1F0 H1FOO H1FX H2AFV H2BFS
H3F3A HADHA HBZ HDAC1 HDAC2 HEATR1 HIP1
HIST1H1B HIST1H2AA HIST1H2BJ HIST1H4A HK2 HMGA1 HMGB2
HMGB3 HMGB4 HMOX1 HNF4A HNRNPA1 HNRNPAB HNRNPD
HNRNPDL HNRNPF HNRNPH1 HNRNPH2 HNRNPK HNRNPL HOXB1
HOXB3 HOXC6 HOXD10 HOXD11 HOXD3 HOXD8 HOXD9
HP1BP3 HR HSP90AA1 HSPA1A HSPA5 HSPA8 HSPE1
HSPG2 IDI1 IFNB1 IGF2BP3 IGF2R IL11 IL12A
IL12B IL13 IL15 IL16 IL17A IL18 IL19
IL20 IL21 IL22 IL24 IL25 IL26 IL27
IL3 IL31 IL32 IL33 IL34 IL37 IL4
IL5 IL7 IL9 ILF2 ILF3 ILK IMMT
IMPDH2 INS IPO4 IPO5 IPO7 IQGAP1 IRAK1
IRAK2 IRAK4 IRF1 IRF2 IRF4 IRF5 IRF7
ITGA4 ITGA5 ITGAM ITGAV ITGB1 ITGB2 ITGB3
ITSN2 JUN KANK2 KARS KIAA0368 KIDINS220 KPNA2
KPNB1 KRT1 KRT10 KRT18 KRT2 KRT31 KRT5
KRT9 LARP1 LASP1 LCP1 LDHA LDHB LGALS1
LMNB1 LONP1 LRBA LRIF1 LRRC59 LSM12 LY96
LYPLA1 LYPLA2 MACF1 MACROD1 MAP2K1 MAP2K2 MAP4
MAPK10 MAPK11 MAPK12 MAPK13 MAPK14 MAPK15 MAPK4
MAPK6 MAPK7 MAPK8 MAPK9 MAPRE1 MCM2 MCM3
MCM4 MCM6 MDH2 MDN1 MECP2 METAP2 MIA
MIF MLLT4 MMP1 MMP10 MMP11 MMP12 MMP13
MMP14 MMP15 MMP16 MMP17 MMP19 MMP20 MMP21
MMP24 MMP25 MMP26 MMP27 MMP28 MMP3 MMP7
MMP8 MNT MPP1 MRPL13 MRPL43 MRPS23 MRPS28
MRPS34 MRPS6 MRTO4 MSN MT-CO2 MYBBP1A MYD88
MYH10 MYH9 MYL12B MYL4 MYL6 MYLIP MYO18A
NA NAA15 NAA38 NACA NACAP1 NAPA NAPG
NARS NAT10 NAV1 NCAN NCBP1 NCL NDUFA2
NDUFA5 NDUFA9 NDUFS1 NDUFS3 NDUFV2 NECAP2 NEUROD6
NFIC NHP2 NHP2L1 NONO NOP56 NOP58 NOS2
NOX1 NOX3 NOX4 NOX5 NPM1 NR3C1 NUDC
NUP155 NUP188 NUP205 NUP210 OLA1 ONECUT1 PA2G4
PAFAH1B2 PAFAH1B3 PAICS PCAF PCBP1 PCM1 PCNA
PDAP1 PDCD10 PDCD5 PDCD6 PDCD6IP PDHA1 PDHB
PDIA3 PDIA6 PDLIM5 PELP1 PES1 PFDN2 PFKL
PFKP PFN1 PGAM5 PGK1 PGR PHB PHF5A
PHGDH PI3 PI4KA PICALM PIK3CA PIK3R1 PKM
PLAT PLEC PLG PMVK PNP POLR1C POLR2A
POLR2C POU5F1 PPIA PPID PPIH PPP1CA PPP1CB
PPP1CC PPP1R8 PPP2CA PPP2R1A PPP2R3A PPT1 PRDX1
PRDX3 PRDX6 PRKCA PRKCB PRKDC PRMT1 PRMT5
PRPF19 PRPF4 PRPF8 PRPS2 PSIP1 PSMA2 PSMA3
PSMA4 PSMA5 PSMA6 PSMA7 PSMB1 PSMB2 PSMB3
PSMB5 PSMB6 PSMC5 PSMC6 PSMD11 PSMD12 PSMD13
PSMD2 PSMD3 PSMD9 PSMG1 PSMG2 PTBP1 PTBP2
PTGES3 PTH PTMS PTPN11 PTPRZ1 PUF60 PYGM
QARS QKI RAB10 RAB11B RAB35 RAB5C RAB7A
RAC1 RAD23B RAE1 RAG1 RALY RANBP1 RAP1B
RAP2B RASSF4 RB1 RBBP4 RBBP7 RBM12 RBPJ
RCC1 RCC2 RFX1 RIF1 RNF19A RNH1 RPL10
RPL10A RPL12 RPL13A RPL14 RPL15 RPL18A RPL19
RPL21 RPL23 RPL23A RPL24 RPL26 RPL27A RPL28
RPL29 RPL3 RPL31 RPL32 RPL35 RPL36 RPL4
RPL5 RPL6 RPL7 RPL8 RPLP0 RPLP2 RPN1
RPS10 RPS15 RPS16 RPS2 RPS23 RPS24 RPS25
RPS26 RPS6KA2 RPS6KA3 RPS7 RPS8 RSU1 RTCB
RUVBL2 S100A7 S100A8 SAR1A SAR1B SARS SART3
SCAP SCRIB SEC22B SEC23B SEC24C SEC31A SEC61B
SELE SEPT2 SEPT7 SEPT9 SERBP1 SET SF1
SF3A3 SF3B1 SF3B3 SF3B6 SFPQ SIPA1 SIX5
SKIV2L2 SLC25A1 SLC2A1 SLC3A2 SLIRP SMAP2 SMARCA4
SMARCB1 SMARCC1 SMARCC2 SMARCD1 SMARCE1 SMCHD1 SNAP23
SND1 SNRNP70 SNRPA SNRPA1 SNRPB SNRPD3 SNRPE
SOX18 SP1 SPTBN1 SRI SRM SRP14 SRSF1
SRSF3 SRSF9 SSB SSBP1 SSRP1 ST13 STAT1
STAT5B STIP1 STOM STON2 STRAP STX4 STXBP3
SUB1 SUMO2 SUPT16H SUPT5H SYNCRIP TAF1 TALDO1
TARS TBC1D15 TBCE TERF2 TERF2IP TFAP4 TFDP1
TFE3 TFRC TGFB1 TGIF1 TGM2 TIA1 TIRAP
TK1 TKT TLE1 TLE2 TLN1 TLR1 TLR10
TLR3 TLR5 TLR6 TLR7 TLR8 TMPO TNFSF11
TOP1 TOP2A TP53 TP73 TPM2 TPM3 TPR
TRAP1 TRIM28 TTC9C TTLL12 TUBB TUBB4B TUBB6
TUFM TXN TYMS U2AF1 U2AF2 UBC UBE2L3
UBE2M UBE2N UBE2NL UBL5 UBR4 UNC119 USP15
USP39 UTP18 VAMP8 VAPA VASP VCAM1 VCL
VDAC1 VEGFA VPS26A VPS28 VPS35 WDR36 XPA
XPC XPO1 XRCC5 XRCC6 YARS YBX1 YES1
YME1L1 YTHDF2 YWHAB YWHAE YWHAG YWHAH YWHAQ
YWHAZ ZFP36 ZNF24 ZW10 ZYX
Data information
Please see the Gene Interactions Track Manual.