Gene interactions and pathways from curated databases and text-mining

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SF3B1 — U2AF2

Pathways - manually collected, often from reviews:

Protein-Protein interactions - manually collected from original source literature:

Studies that report less than 10 interactions are marked with *

  • IRef Bind Interaction: SF3B1 — U2AF2 Gozani et al., Mol Cell Biol 1998*
  • IRef Bind_translation Interaction: SF3B1 — U2AF2 (affinity chromatography technology) Gozani et al., Mol Cell Biol 1998*
  • IRef Bind_translation Interaction: SF3B1 — U2AF2 (far western blotting) Gozani et al., Mol Cell Biol 1998*
  • IRef Bind_translation Interaction: SF3B1 — U2AF2 (two hybrid) Gozani et al., Mol Cell Biol 1998*
  • IRef Biogrid Interaction: SF3B1 — U2AF2 (colocalization, biochemical) Havugimana et al., Cell 2012
  • MIPS CORUM 17S U2 snRNP: 17S U2 snRNP complex (CHERP-DDX46-DHX15-DNAJC8-HMG20B-HSPD1-PHF5A-PUF60-RBM17-SF3A1-SF3A2-SF3A3-SF3B1-SF3B6-SF3B2-SF3B3-SF3B4-SF3B5-SRSF1-SMNDC1-SNRPA1-SNRPB-SNRPB2-SNRPD1-SNRPD2-SNRPD3-SNRPE-SNRPF-SNRPG-U2SURP-TRAP1-U2AF1-U2AF2) Will et al., EMBO J 2002
  • MIPS CORUM Spliceosome: Spliceosome complex (ACIN1-AQR-DDX39B-BCAS2-BUD13-BUD31-CFAP20-CACTIN-C19orf43-CD2BP2-CDC40-CDC5L-CIRBP-CPSF6-CDK12-CRNKL1-LUC7L3-CTNNBL1-CWC15-CWC22-DDX17-DDX23-DDX3X-DDX41-DDX46-DDX5-DGCR14-DHX15-DHX16-DHX38-DHX8-DHX9-DNAJC8-EFTUD2-EIF4A3-PAXBP1-HTATSF1-IGF2BP3-IK-ISY1-KIAA1429-LSM2-LSM3-LSM4-LSM6-LSM7-MAGOH-MFAP1-MOV10-NCBP1-NCBP2-NHP2L1-NUDT21-PABPC1-PLRG1-PPIE-PPIH-PPIL1-PPIL2-PPIL3-PPM1G-PPWD1-PRPF18-PRPF19-PRPF3-PRPF31-PRPF4-PRPF40A-PRPF4B-PRPF6-PRPF8-PUF60-RBM15-RBM17-RBM22-RBM25-RBM39-RBM8A-RNPS1-SART1-SF1-SF3A1-SF3A2-SF3A3-SF3B1-SF3B6-SF3B2-SF3B3-SF3B4-SRSF1-SRSF11-SRSF2-SRSF3-SRSF4-SRSF5-SRSF7-SKIV2L2-SLU7-SMNDC1-SMU1-SNRNP200-SNRNP27-SNRNP40-SNRNP70-SNRPA-SNRPA1-SNRPB-SNRPB2-SNRPC-SNRPD1-SNRPD2-SNRPD3-SNRPE-SNRPF-SNRPG-SNW1-SPEN-U2SURP-SRRM1-SRRM2-SRRT-SRSF6-SRSF9-SYF2-TCERG1-TFIP11-THOC1-THOC2-THOC3-ALYREF-THOC5-THOC6-THOC7-TRA2B-TXNL4A-U2AF1-U2AF2-USP39-WBP11-WTAP-XAB2-ZNF207) Zhou et al., Nature 2002
  • IRef Corum Interaction: Complex of 427 proteins (association, molecular sieving) Zhou et al., Nature 2002
  • IRef Corum Interaction: Complex of 34 proteins (association, coimmunoprecipitation) Will et al., EMBO J 2002
  • IRef Ophid Interaction: SF3B1 — U2AF2 (aggregation, interologs mapping) Brown et al., Bioinformatics 2005