UCSC Genome Browser on Human (GRCh37/hg19)
move zoom in zoom out
chr4:54,954,529-54,979,841 25,313 bp.
move start
  Click on a feature for details. Shift+click+drag to zoom in. Click grey side bars for track options. Drag side bars or labels up or down to reorder tracks. Drag tracks left or right to new position. Press "?" for keyboard shortcuts. Use drop-down controls below and press refresh to alter tracks displayed.   move end
  
-   Custom Tracks
Fetal RPE H3K27ac peaks
GFP peaks
iPSC-RPE H3K27ac peaks1
sorted_GFP_mapped_footprints.bed
sorted_iPSC_mapped_footprints.bed
sorted_RFP_mapped_footprints.bed
-   hufATAC
iPSC_ATAC
RPE_ATAC_TYR_high
RPE_ATAC_TYR_low
Common_Peaks
GFP__not__IPSC_direct_peaks
GFP__not__RFP_direct_peaks
GFP_IIE_5_peaks
GFP_IIF_6_peaks
GFP_IIG_7_peaks
GFP_IIH_8_peaks
HINT
Homer_Interesting_TFBS
iPSC_IIi_9_peaks
iPSC_IIJ_10_peaks
iPSC_IIK_11_peaks
iPSC_IIL_12_peaks
Retina_DNase_ENCODE_ENCFF228TFA
Retina_DNase_ENCODE_ENCFF245TTR
Retina_DNase_ENCODE_ENCFF701VIZ
Retina_DNase_ENCODE_ENCFF798YBK
Retina_DNase_ENCODE_ENCFF940MWX
RFP_IIE_1_peaks
RFP_IIF_2_peaks
RFP_IIG_3_peaks
RFP_IIH_4_peaks
RPE_DNase_ENCODE_ENCFF055DVD
RPE_DNase_ENCODE_ENCFF935CAL
sig_HINT
-   Track Collections
GFP-positive 3D1iPSC-RPE
GFP-negative 3D1iPSC-RPE
iPSC_3D1
+   Mapping and Sequencing
-   Genes and Gene Predictions
UCSC Genes
NCBI RefSeq
CCDS
CRISPR Targets
Ensembl Genes
EvoFold
Exoniphy
updated GENCODE Versions
H-Inv 7.0
HGNC
IKMC Genes Mapped
lincRNAs
LRG Transcripts
MGC Genes
Old UCSC Genes
ORFeome Clones
Other RefSeq
Pfam in UCSC Gene
Prediction Archive
Retroposed Genes
sno/miRNA
TransMap V5
tRNA Genes
UCSC Alt Events
UniProt
Vega Genes
Yale Pseudo60
-   Phenotype and Literature
Publications
COVID Rare Harmful Var
CADD
ClinGen
ClinGen CNVs
ClinVar Variants
Constraint scores
Coriell CNVs
COSMIC Regions
DECIPHER CNVs
DECIPHER SNVs
Development Delay
new Dosage Sensitivity
GAD View
GenCC
Gene Interactions
GeneReviews
GWAS Catalog
Haploinsufficiency
HGMD public
Lens Patents
LOVD Variants
MGI Mouse QTL
OMIM Alleles
OMIM Cyto Loci
OMIM Genes
Orphanet
PanelApp
Polygenic Risk Scores
new Prediction Scores
REVEL Scores
RGD Human QTL
RGD Rat QTL
SNPedia
UniProt Variants
Variants in Papers
Web Sequences
-   mRNA and EST
CGAP SAGE
Gene Bounds
H-Inv
Human ESTs
Human mRNAs
Human RNA Editing
Other ESTs
Other mRNAs
Poly(A)
PolyA-Seq
SIB Alt-Splicing
Spliced ESTs
UniGene
-   Expression
GTEx Gene V8
Allen Brain
Burge RNA-seq
CSHL Small RNA-seq
ENC Exon Array
ENC ProtGeno
ENC RNA-seq
EPDnew Promoters
Affy Archive
GIS RNA PET
GNF Atlas 2
GTEx Gene
GTEx Transcript
GWIPS-viz Riboseq
Illumina WG-6
PeptideAtlas
qPCR Primers
RIKEN CAGE Loc
Sestan Brain
-   Regulation
ENCODE Regulation
CD34 DnaseI
CpG Islands
ENC Chromatin
ENC DNA Methyl
ENC DNase/FAIRE
ENC Histone
ENC RNA Binding
ENC TF Binding
new FANTOM5
FSU Repli-chip
GeneHancer
Genome Segments
GTEx Combined eQTL
GTEx Tissue eQTL
updated JASPAR Transcription Factors
NKI Nuc Lamina
ORegAnno
Rao 2014 Hi-C
ReMap ChIP-seq
Stanf Nucleosome
SUNY SwitchGear
SwitchGear TSS
TFBS Conserved
TS miRNA Targets
UCSF Brain Methyl
UMMS Brain Hist
UW Repli-seq
VISTA Enhancers
-   Comparative Genomics
Conservation
Cons 46-Way
Cons Indels MmCf
Evo Cpg
GERP
phastBias gBGC
Primate Chain/Net
Placental Chain/Net
Vertebrate Chain/Net
CHM13 alignments
-   Neandertal Assembly and Analysis
5% Lowest S
Cand. Gene Flow
H-C Coding Diffs
Neandertal Methyl
Neandertal Mito
[No data-chr4]
Neandertal Seq
S SNPs
Sel Swp Scan (S)
-   Denisova Assembly and Analysis
Denisova Methyl
Denisova Seq
Denisova Variants
Mod Hum Variants
Modern Derived
-   Variation
dbSNP 155
COVID GWAS v4
COVID GWAS v3
1000G Archive
Array Probesets
dbSNP Archive
dbVar Common Struct Var
DGV Struct Var
EVS Variants
ExAC
Genome In a Bottle
Genome Variants
GIS DNA PET
gnomAD
HAIB Genotype
HapMap SNPs
HGDP Allele Freq
Platinum Genomes
-   Repeats
RepeatMasker
Interrupted Rpts
Microsatellite
NumtS Sequence
Segmental Dups
Self Chain
Simple Repeats
WM + SDust
Invisible link