Human Gene LINC00520 (ENST00000649691.1) from GENCODE V38
  Description: Homo sapiens long intergenic non-protein coding RNA 520 (LINC00520), transcript variant 1, long non-coding RNA. (from RefSeq NR_026796)
Gencode Transcript: ENST00000649691.1
Gencode Gene: ENSG00000258791.9
Transcript (Including UTRs)
   Position: hg38 chr14:55,781,137-55,796,691 Size: 15,555 Total Exon Count: 4 Strand: -


Page IndexSequence and LinksCTDRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2021-09-27 09:51:20

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr14:55,781,137-55,796,691)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEnsemblEntrez GeneExonPrimerHGNCLynx
PubMedWikipedia

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.05 RPKM in Esophagus - Mucosa
Total median expression: 0.34 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
 

-  Other Names for This Gene
  Alternate Gene Symbols: NR_026796, uc010trd.1, uc010trd.2, uc010trd.3, uc010trd.4
UCSC ID: ENST00000649691.1
RefSeq Accession: NR_026796

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.