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UCSC Genome Browser Gene Interaction Graph
Gene interactions and pathways from curated databases and text-mining
BRCA1: top 25 interacting genes (chr17:41196311-41277500)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only BRCA1-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-BRCA1 interactions     Show top Genes on graph    

Less-frequently mentioned interactions with BRCA1, not among the Top 25
Other genes interacting with BRCA1. Mouse-over to show number of abstracts or databases. Sorted by article count (sort alphabetically).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

CYP19A1 CASP8 PGR CASP7 CASP6 DDB2 CHKA
CCND1 CASP9 IGF2 E2F6 FANCD2 CTBP1 HDAC1
GADD45A TP53BP1 MYLIP ZNF217 CDK1 PRL ZNF516
CTBP2 BRCA3 SMC3 EPHB2 E2F3 EZH2 JUN
MATK XIST PARP6 LRPAP1 SMC4 PARP1 RCOR3
CYP1A1 CTD ZEB2 PARP14 HDAC2 E2F4 PLK1
E2F1 PARP4 NPY4R E2F8 IFNG CDK9 EGR1
PARP9 PIK3CA E2F2 RAD50 BACH1 PARP15 PARP3
EXO1 SUMO1 EHMT2 XPC NBN RNF8 H2AFX
PARP2 PARP16 CDYL LCOR EHMT1 SMC2 RBBP8
E2F5 PARP12 KDM1A IGF1R RBL1 RREB1 PARP11
NEDD1 CDK2 MRE11A CCNT1 E2F7 PARP10 SMC5
PIK3R1 NEK2 PARP8 BCL2 CDK4 HMGA1 ID4
SMC6 S100A6 ZNF423 RAD51 RCOR1 ZEB1 CBX4
TERT AR RBL2 TATDN2 PPP1CC SPATA4 LYL1
CCAR2 ERCC2 CCNA1 HNF1A B2M TERF1 ENO1
PSAP PPP6C CTCFL C1orf204 MZT1 PAX2 JUP
CSTF2 PPP6R1 ANKRD26 GTF2H1 TADA3 TAF10 BRAP
PPP1R18 NELFB RTKN2 PILRB TPM3 SH2B1 SHFM1
KIF1B THOC3 DHX9 CTCF SRSF1 ATF1 BORA
RAD23B RAD21 TSEN54 CSTF3 UBE2L3 PIAS1 HLTF
FANCI BUB1B MAX TP63 ELK1 BLOC1S2 GINS2
HIVEP1 FANCC MT-ND1 SP1 RPA1 NCOA2 TACC1
WDR6 ATRIP UBE2C EED ZSCAN21 PRMT1 MTOR
UBB GTF2E2 DALRD3 HIST3H3 DNAJA1 CDC27 CETN1
MED24 SMARCC1 SSFA2 PPP2R5C BRD7 UBE2E1 ERCC3
CEP350 TFDP1 VSIG8 MRPL36 YWHAZ FLII VCP
TPTE2 HERC2 HSPD1 TLE4 CSNK2A1 RPA2 HSPA8
ANAPC4 PREP WDR48 CREBBP CDC26 PMS2 ARNT
UBE2E2 POLH PPP1CB RPRD1B HIBADH DDX39A MED23
LDB1 DNHD1 CDC16 IFNB1 SMARCE1 CCNA2 ATP1B1
ORC2 UBE2W ANAPC13 NFKB1 KPNA1 FANCA DBF4
JUNB JUND PIAS4 STAT5A FLNA PPP2CA PSMA6
RICTOR SMAD4 UBE2D1 MED1 LDB2 RPSA HMGA2
KPNA6 XRCC6 ZCCHC8 MZT2B TRRAP USH2A GTF3C4
NUP153 RWDD4 HIST2H3C EP300 SMAD2 KPNA2 AP2A1
MED17 NUFIP1 CRIPAK ACTG1 PRKDC SUZ12 TREX1
LONRF1 STAG1 XIAP ELK4 PABPC1 REV1 TAF1
MDC1 LDHC TRIM46 CDKN2AIP RBBP7 ZIM2 C11orf51
YBX1 NCK1 VDR ANAPC1 NPC2 DDX24 PHB2
FLI1 SKP1 MYL12A AURKC BABAM1 BRIP1 HMMR
ETV5 PISD CNTN4 HIF1A DNAJA3 PPHLN1 INPP1
DCLRE1C GPN1 GTF2H2 UBE2N TAF5L CCNH TFAP4
EZR GFI1B TBP CNTLN EIF3B SMC1A TCTEX1D2
AURKA ANKRD44 GTF2E1 PPP1R9B MYZAP HIST1H4A GABPB1
RBX1 ORC3 TP73 IFNA1 COMMD1 COPE UBE2E3
EIF5B UBE2I RAD18 WNT2B STAG2 TRIM24 ETS1
NFYA GABPA HNF4A MNAT1 RANBP9 SUPT3H CDS1
ARID1A MAPKAP1 EIF4A2 SMARCA4 KAT2A PHF12 ACTL6A
CSNK2B CDC23 RPGRIP1 SDK2 H2AFY RPAP2 HIST2H2AC
DNAJB1 DRG1 CUBN COL1A1 CCNE1 ANAPC11 RAD51B
TAF9 FBXO44 STAG3 RNF216 TERF2 MORF4L1 RPRD1A
TARS SNX6 ANKRD28 MSH3 UBE2K STAT3 RECQL5
GNB2L1 POMGNT1 FANCF SMC1B ZNF280D PEX5 ANTXR1
KIAA0101 ZDHHC5 FANCG SOX30 HIST2H3A GGN UBE3A
RPL31 GTF2H4 DCN FBXO5 PPP6R3 HGF FANCE
ARID1B TFDP2 CDKN1B CHEK1 MSN ANAPC16 MZT2A
LCMT1 MAP4K4 SMARCA2 SYCP2 RNGTT CDKN2D DMC1
GTF2H3 CRYZL1 UBE2D2 CABYR ERO1LB ASH2L TOPBP1
UBE2T ATP1B3 TPM1 XRCC1 WBSCR16 SMARCD2 RPAP3
NPM1 MED13 ITIH5 ONECUT1 ZBTB14 HECTD3 FOXO3
ANAPC2 TNF ANAPC10 SMARCC2 LMNA MTA2 AURKB
SNRNP200 CUL7 PSMG1 REC8 TRIM74 BRAT1 RBBP4
STRN SNX3 HLA-C MED21 TEX101 RDX RPA3
NKAPL CAPZB CNRIP1 FUBP1 MAP3K1 USF2 FOXA1
GPN3 USP2 MAN2C1 UBE2J1 HIST2H3D NF1 ERCC6
PPP1CA FTSJ2 TULP2 HSPA14 EIF4G1 RELA ANAPC7
NCOA3 UBE2D3 UBE2S ANAPC5 PPP1R3A SUPT6H TFAP2C
GTF2I SKP2 APLP2 ALDH9A1

Data information
Please see the Gene Interactions Track Manual.