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UCSC Genome Browser Gene Interaction Graph
Gene interactions and pathways from curated databases and text-mining
COPA: top 25 interacting genes (chr1:160258376-160313354)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only COPA-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-COPA interactions     Show top Genes on graph    

Less-frequently mentioned interactions with COPA, not among the Top 25
Other genes interacting with COPA. Mouse-over to show number of abstracts or databases. Sorted alphabetically (sort by article count).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

AARS ABCC3 ABCE1 ABHD16A ACACA ACAT1 ACER3
ACO2 ACOT8 ACSL3 ACSL4 ACSM3 ACTG1 ACTG2
ACTN4 ADHFE1 ADRM1 ADSL AFTPH AGFG1 AGK
AGO1 AGO2 AGR2 AIFM1 AK2 AKAP8L ALDH7A1
ALDH9A1 ALDOA ALG1 ALYREF AMBRA1 ANKFY1 ANKHD1
ANKRD28 ANKRD52 ANP32B ANXA1 ANXA2 ANXA6 AP1B1
AP1G1 AP1G2 AP1S1 AP1S2 AP2A1 AP2A2 AP2B1
AP2M1 AP2S1 AP3B2 AP3S1 AP4B1 AP4E1 APOE
APRT ARAF ARFGAP3 ARG1 ARHGAP15 ARL2 ARPC3
ARPC4 ASL ASNS ASPH ASS1 ATAD3B ATG101
ATG13 ATL2 ATP1A1 ATP2A2 ATP5A1 ATP5C1 ATP5J2
ATP5O ATP6V1D ATXN10 AURKB BAG2 BCAP31 BET1L
BIN3 BOLA2 BOLA2B BSG BYSL C15orf38-AP3S2 C19orf70
C2orf47 C3orf58 CAB39L CACYBP CAD CAND1 CANX
CAP2 CAPN5 CAPZA1 CAPZB CBR1 CBS CCDC85C
CCNB2 CCT2 CCT3 CCT4 CCT5 CCT6A CDC42EP1
CDIPT CDK2 CEPT1 CETN1 CETN2 CETN3 CFL1
CHD4 CKAP4 CKB CLIC1 CLN6 CLPP CLPX
CLTC CMSS1 CNBP CNOT1 CNOT6 CNOT8 COASY
COP COPG1 COPG2 COPZ2 CORO1C CRKL CSNK1A1
CSNK1E CTPS1 CTSB CTSD CTSH CUTA CYB5R3
CYCS DARS DCAF11 DCAF17 DCAF5 DDA1 DDB1
DDB2 DDOST DDX18 DDX20 DDX39A DDX42 DDX47
DDX50 DDX6 DES DHCR24 DHCR7 DHX15 DHX30
DHX36 DHX38 DHX9 DICER1 DIMT1 DLX4 DNAJA1
DNAJA2 DNAJA4 DNAJB1 DNAJB11 DOHH DPM1 DSC1
DYNC1H1 EBNA1BP2 ECHS1 EDC4 EEF1A1 EEF1E1 EEF1G
EEF2 EIF2A EIF3A EIF3B EIF3G EIF3H EIF3I
EIF4A1 EIF4A3 EIF4H ELAVL1 ELP6 EMD ENO1
EPN1 EPRS EPS15 ERGIC2 ERP44 ESD ESR1
ESYT2 ETFA EXOC3 F7 FAF2 FANCI FAR1
FARSB FBL FBXO25 FBXO32 FBXO6 FCGBP FERMT3
FKBP4 FKBP5 FKBP8 FLG2 FLNA FLNB FLNC
FLOT1 FMR1 FOXK1 FOXK2 FOXO3 FSCN1 FXR2
GABARAP GALK1 GALT GANAB GART GATAD2A GCDH
GCH1 GCN1L1 GEMIN2 GEMIN4 GFPT2 GLRX3 GLUD1
GMPS GNAI1 GNAI2 GNAI3 GNB1L GNB2 GNB4
GNL2 GNL3 GOSR2 GPN1 GRPEL1 GSTP1 GTF3C1
GTF3C3 GTF3C4 GTF3C5 GTF3C6 GYS1 H1FX HADHA
HADHB HAX1 HBZ HEATR1 HIGD1A HIST1H1B HIST1H2BL
HK1 HK2 HMGB1 HMGB2 HNRNPC HNRNPDL HNRNPF
HNRNPH1 HNRNPL HNRNPM HNRNPU HP1BP3 HRNR HSD17B12
HSD17B3 HSD17B7 HSP90AA1 HSP90AB1 HSPA1A HSPA4 HSPA4L
HSPA5 HSPA9 HSPBP1 HSPD1 HSPE1 HSPH1 HUWE1
HYOU1 IARS IDH3A IDH3G IFIH1 IGF2BP1 IGF2BP3
IGF2R IGKC IKBKG IL20RA ILF2 ILF3 IMMT
IMPDH2 IPO5 IPO7 IPO9 IQGAP1 IRS4 ITCH
ITGA4 ITGA5 ITGB1 ITM2C KDELR2 KIAA0368 KIF5B
KLC2 KPNA2 KPNA6 KPNB1 KRR1 KRT1 KRT10
KRT18 KRT2 KRT77 KRT9 LAGE3 LAP3 LARP1
LARS LAS1L LDHA LDHB LETM1 LGALS1 LGALS4
LMAN1 LMNB1 LONP1 LRPPRC LSM4 LTA4H LYPLA1
LYPLA2 LYPLAL1 LZTR1 MACF1 MACROD1 MAD2L1 MAGED1
MAGED2 MAP2K6 MAPK1 MAPRE1 MARS MAT1A MAT2A
MATR3 MBD3 MCF2 MCF2L MCM2 MCM3 MCM4
MCM6 MDH2 MDN1 ME1 MGME1 MIF MLF2
MLH1 MLLT4 MLST8 MRPL13 MRPL15 MRPL43 MRPS22
MRPS23 MRTO4 MSN MT-CO2 MTA1 MTA2 MTHFD2
MTNR1B MUC2 MYBBP1A MYH10 MYH2 MYH4 MYH9
MYL4 MYL6 NAA15 NAA38 NACA NAMPT NANS
NAPA NAT10 NCALD NCF4 NCL NDFIP2 NDRG1
NDUFA4 NDUFA8 NDUFS1 NDUFS3 NDUFS8 NECAP2 NHP2L1
NONO NOP56 NPM1 NRBF2 NSF NT5C3B NUDC
NUP188 NUP205 NUP210 NUP85 NUP93 OGFOD1 OSBPL8
OSGEP PA2G4 PABPC1 PABPC3 PAFAH1B3 PAICS PAK1IP1
PARP12 PARVA PCBP2 PCM1 PCYT1A PDCD10 PDCD2
PDCD6 PDGFRB PDHA1 PDIA6 PELO PELP1 PFDN2
PFKL PFN1 PGK1 PGRMC1 PHB PHB2 PHGDH
PI4KA PKM PLEC PMS2 PMVK PNP POLDIP2
POLE2 POLR1A POLR1C POLR2H POLR3H PPA1 PPAP2C
PPIA PPID PPIH PPM1G PPP1CB PPP1CC PPP2CA
PPP2R1A PPP2R5C PPP2R5E PPP5C PPP6C PPP6R1 PPP6R2
PPP6R3 PPT1 PPTC7 PRDX1 PRDX3 PRDX6 PRKAA1
PRKACA PRKDC PRMT1 PRMT5 PRPF8 PSMA3 PSMA4
PSMA5 PSMA6 PSMA7 PSMB2 PSMB3 PSMB6 PSMC2
PSMC4 PSMC5 PSMC6 PSMD11 PSMD13 PSMD2 PSMD3
PSMD6 PSMD8 PTCD3 PTGDS PTGES3 PTP4A2 PTPLAD1
PTPN11 PTPRH PYCRL PYGL QARS RAB10 RAB18
RAB1B RAB5C RAB7A RAC1 RAD23B RALY RAP1B
RAP2B RAPGEFL1 RARS RBBP7 RBM10 RCC1 RCC2
RCN2 RDH14 RDH8 RER1 REXO2 RFC2 RFC3
RHBDD2 RNF149 RPA1 RPL10 RPL11 RPL12 RPL13
RPL13A RPL14 RPL15 RPL17 RPL18 RPL18A RPL19
RPL21 RPL23 RPL23A RPL24 RPL26 RPL27A RPL28
RPL29 RPL3 RPL31 RPL32 RPL35 RPL36 RPL37A
RPL4 RPL5 RPL6 RPL7 RPL7A RPL8 RPL9
RPLP0 RPLP1 RPN1 RPN2 RPS10 RPS13 RPS15A
RPS16 RPS18 RPS2 RPS23 RPS24 RPS25 RPS26
RPS27 RPS3 RPS3A RPS4X RPS5 RPS6 RPS7
RPS8 RPS9 RQCD1 RRBP1 RRM2 RRP15 RSL1D1
RUVBL1 RUVBL2 S100A11 S100A7 S100A8 SACM1L SARS
SART3 SCO2 SCRIB SCYL1 SDF2L1 SDF4 SDHA
SEC22B SEC23A SEC24A SEC24C SEC24D SEC31A SEC61A1
SEC61B SEH1L SELENBP1 SELO SEPT2 SEPT7 SEPT9
SERPINF1 SF3B1 SF3B2 SF3B3 SF3B6 SGIP1 SHCBP1
SHMT1 SHMT2 SHPRH SIPA1L3 SIRT7 SLC16A1 SLC1A5
SLC25A1 SLC25A10 SLC25A11 SLC25A12 SLC25A13 SLC25A19 SLC25A21
SLC25A22 SLC25A23 SLC25A3 SLC25A33 SLC25A4 SLC25A5 SLC25A6
SLC2A1 SLC39A7 SLC3A2 SLC4A5 SLC7A5 SMARCA4 SMC3
SMC4 SMCHD1 SMN1 SNRNP200 SNRNP70 SNRPA1 SNRPD3
SNRPF SOD2 SPG20 SPTAN1 SPTBN1 SPTLC1 SQSTM1
SRI SRM SRP54 SRPRB SSR1 SSR3 SSR4
SSRP1 STAP2 STAT2 STAT3 STAT5B STIP1 STOM
STON2 STRAP STT3A STUB1 STX8 SUCLG1 SUMO1
SUMO2 SYNCRIP SYNE1 SYNJ1 SYNRG TAGLN TALDO1
TARS TARS2 TBL2 TBL3 TCEB1 TCP1 TECR
TEX10 TFAM TFRC THOC2 TIA1 TIMM13 TIMM23
TIMM50 TIMMDC1 TLN1 TMED10 TMED2 TMED3 TMED7
TMED9 TMEM165 TMEM184C TMEM33 TMPO TMSB4X TOMM22
TOMM70A TOP1 TP53 TPR TPRG1L TRAFD1 TRAP1
TRIM23 TRIM28 TTLL12 TUBA1A TUBA1B TUBA1C TUBB
TUBB2B TUBB3 TUBB4A TUBB4B TUBB6 TUFM TXN
TXN2 TYMS UBA5 UBA52 UBB UBC UBD
UBE2NL UBE2S UBR2 UBR4 UBR5 UBXN6 UPF1
USMG5 USP44 USP49 USP7 UTP20 VAMP8 VAPA
VARS VASP VCAM1 VCL VCP VDAC1 VDAC3
VIM VMA21 VPRBP VPS35 VPS51 WARS WDR18
WDR59 WDR6 WDTC1 WWP1 XPO1 XPO5 XPOT
XRCC6 YARS2 YBX1 YWHAG YWHAQ ZER1 ZNF326
ZW10 ZYX

Data information
Please see the Gene Interactions Track Manual.