Gene interactions and pathways from curated databases and text-mining
SF3B1: top 25 interacting genes (chr2:198256697-198299771)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only SF3B1-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-SF3B1 interactions     Show top Genes on graph    

Less-frequently mentioned interactions with SF3B1, not among the Top 25
Other genes interacting with SF3B1. Mouse-over to show number of abstracts or databases. Sorted alphabetically (sort by article count).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

AARS ABCF1 ACACA ACIN1 ACLY ACOT13 ACTBL2
ACTN4 ACTR3 AGO1 AGO2 AHNAK AIMP2 AKR1C1
ALDH1B1 ALDOA ALYREF ANP32B ANXA1 ANXA2 AP2A1
AP2A2 AP2B1 AP2M1 APBB1 APC APOBEC3C AQR
ARF6 ARHGEF1 ARHGEF17 ARHGEF2 ARID1A ARL2 ARPC3
ARPC4 ARRB2 ATAD3B ATG12 ATP5A1 ATP5B ATP5C1
ATP6V1B2 AXIN1 BACH1 BAG2 BAG6 BANF1 BAZ1B
BBS9 BCLAF1 BMP2K BRF2 BROX BUD13 BUD31
BZW2 C10orf11 C11orf58 C14orf166 C16orf80 C19orf43 C1QBP
CACTIN CACYBP CALM1 CAMSAP2 CAMSAP3 CAND1 CAP1
CAPZA1 CAPZB CASC3 CBX3 CCDC77 CCDC9 CCDC97
CCNE1 CCNT1 CCT2 CCT4 CCT5 CCT6A CCT7
CD2BP2 CDC14A CDC40 CDC42EP1 CDK12 CDK17 CELF1
CELF2 CFAP20 CFL1 CFLAR CHERP CHTOP CIRBP
CKAP5 CLASP2 CLIC2 CLIC5 CLNS1A CLP1 CLTB
CLTC CMSS1 CNN2 CNOT1 COMT COPA COPB1
COPE COPS5 CORO1B CORO1C CPNE1 CPSF6 CPSF7
CRNKL1 CROCC CRTAP CSNK1A1 CSNK1D CSNK1E CSNK2A1
CSNK2B CTNNA1 CTNNB1 CTNNBL1 CUL1 CUL3 CWC22
CWC27 DAB2 DDOST DDX1 DDX17 DDX18 DDX21
DDX23 DDX39A DDX39B DDX3X DDX41 DDX42 DDX46
DDX47 DDX5 DDX50 DDX6 DGCR14 DHCR7 DHX15
DHX16 DHX30 DHX35 DHX36 DHX38 DHX8 DHX9
DIAPH1 DIAPH3 DICER1 DIMT1 DLD DLX4 DNAJB1
DNAJC17 DNAJC5 DNAJC5B DNAJC5G DNAJC8 DYNLL2 EBNA1BP2
EEF1A1 EEF1B2 EEF2 EFTUD2 EIF2S3 EIF3B EIF3F
EIF3K EIF4A1 EIF4A3 EIF4E EIF4G2 EIF4H EIF5
EIF5B ELAVL1 EMG1 ENKD1 ENO1 EP300 EPB41
EPN1 EPRS EPS15 ERH ERI2 ERLIN2 ESR1
ESYT1 ESYT2 FAM110B FAM64A FAM83D FAM83H FARSB
FAU FBL FBXL13 FDFT1 FEN1 FERMT3 FLG2
FLII FLNA FLNB FLOT1 FLOT2 FMR1 FN1
FRG1 FSCN1 FUS FXR2 FYTTD1 G6PD GALE
GAR1 GART GAS7 GDI2 GEMIN2 GEMIN4 GIPC1
GLRX3 GLUD1 GMPS GNAI3 GNL3 GPATCH1 GPATCH11
GPR98 GRIA4 GSK3B GSTK1 GSTO1 GTF3C1 GTF3C4
GTPBP4 H1FX H2AFV H2BFS H3F3A HADHA HDAC1
HDAC3 HDAC5 HERC1 HIRA HIST1H1B HIST1H1C HIST1H1E
HIST1H2AA HIST1H2AD HIST1H2BD HIST1H2BJ HIST1H4A HIST3H3 HLTF
HMG20B HMGA1 HMGB1 HMGB2 HMMR HNRNPA1 HNRNPA2B1
HNRNPA3 HNRNPC HNRNPDL HNRNPF HNRNPH1 HNRNPH2 HNRNPK
HNRNPL HNRNPM HNRNPR HNRNPU HNRNPUL1 HRNR HSD17B4
HSP90AA1 HSP90AB1 HSPA1A HSPA5 HSPB1 HSPD1 HSPG2
HTATSF1 IDI1 IGF2BP1 IGF2BP3 IGF2R IK IKBKE
ILF3 ILK IMMT IMPDH2 IPO4 IPO5 IQCB1
IQGAP1 IQGAP3 ISY1 ITCH ITGA4 ITGA5 ITGAV
ITGB1 KANK2 KARS KIAA0368 KIAA1429 KIDINS220 KLHL40
KPNA2 KPNB1 KRR1 KRT1 KRT10 KRT14 KRT16
KRT18 KRT2 KRT31 KRT5 KRT9 LAGE3 LARS
LAS1L LASP1 LCP1 LDHA LDHB LEPRE1 LGALS1
LINC00846 LRBA LRRC59 LRRC67 LRRFIP2 LRTOMT LSM12
LSM2 LSM3 LSM4 LSM6 LSM7 LSMD1 LUC7L
LUC7L3 LYAR MACF1 MAGOH MAGOHB MAP2 MAP4
MAPRE1 MATR3 MCF2L MCM2 MCM3 MCM6 MDH2
MDN1 MELK MFAP1 MKI67 MLLT4 MOV10 MPP1
MRPL13 MRPS15 MRPS16 MRPS22 MRPS23 MRPS27 MRPS28
MRPS34 MRPS5 MRPS6 MRTO4 MSH6 MSN MT-CO2
MYBBP1A MYC MYH10 MYH2 MYH9 MYL12B MYL4
MYL6 NAA15 NACA NAPA NAPG NARF NARS
NAT10 NAT8B NCBP1 NCBP2 NCBP2L NCL NDUFA2
NDUFA5 NDUFA9 NDUFS3 NDUFV2 NECAP2 NELFE NHP2
NHP2L1 NOL8 NOLC1 NONO NOP2 NOP56 NOP58
NPM1 NRG1 NUDT21 NUP155 NUP205 NUP210 OGT
OLA1 OTUD4 PA2G4 PABPC1 PABPC3 PABPN1 PAFAH1B2
PAICS PAK1IP1 PAPD7 PAPOLA PARP1 PAXBP1 PCBP2
PCID2 PCM1 PCMTD2 PCNA PDAP1 PDCD10 PDCD5
PDCD7 PDHB PDIA6 PDLIM5 PELP1 PFKL PFKP
PGAM5 PGK1 PHB PHB2 PHGDH PI4KA PIAS1
PICALM PKM PLEC PNN POLR1A POLR1C POLR2C
POLR2H POLR2I POLR2J PPID PPIE PPIH PPIL1
PPIL2 PPIL3 PPM1G PPP1R8 PPP2CA PPP2R1A PPWD1
PRDX3 PRDX6 PRKCB PRMT1 PRMT5 PRPF18 PRPF3
PRPF31 PRPF4 PRPF40A PRPF40B PRPF4B PRPF6 PRPF8
PRPS2 PSMA2 PSMA5 PSMA6 PSMB1 PSMB2 PSMB3
PSMB5 PSMC6 PSMD11 PSMD13 PSMG1 PSMG2 PTBP1
PTBP2 PTBP3 PTCD3 PTGES3 PUF60 PUM1 QARS
QKI RAB10 RAB11B RAB35 RAB5C RAB7A RAC1
RAE1 RALY RAP1B RAP2B RB1CC1 RBBP4 RBM10
RBM12 RBM14 RBM15 RBM17 RBM22 RBM25 RBM39
RBM4 RBM8A RBMS1 RBMX2 RCC1 RCC2 RNF149
RNH1 RNPC3 RNPS1 RPA1 RPA2 RPL10 RPL10A
RPL11 RPL12 RPL13 RPL13A RPL14 RPL15 RPL17
RPL18 RPL18A RPL19 RPL21 RPL23 RPL23A RPL24
RPL26 RPL26L1 RPL27A RPL28 RPL29 RPL3 RPL31
RPL35 RPL35A RPL36 RPL37A RPL38 RPL4 RPL5
RPL6 RPL7 RPL7A RPL8 RPL9 RPLP0 RPLP2
RPN1 RPS10 RPS11 RPS13 RPS15 RPS15A RPS16
RPS18 RPS2 RPS23 RPS24 RPS25 RPS26 RPS3
RPS3A RPS4X RPS5 RPS6 RPS7 RPS8 RPS9
RRP36 RSL1D1 RSU1 RTCB RUVBL2 SACS SAP130
SAP18 SAR1A SART1 SART3 SCAF1 SCN3A SCRIB
SEC22B SEC23B SEC24C SEC61B SEPT2 SEPT9 SET
SETX SF1 SF3B6 SIPA1 SIRT7 SKIV2L2 SLC25A1
SLC25A3 SLC25A5 SLC25A6 SLC3A2 SLC4A5 SLU7 SMAD1
SMAD5 SMAD9 SMAP2 SMARCC1 SMARCC2 SMARCE1 SMCHD1
SMNDC1 SMU1 SMURF1 SNAP23 SND1 SNIP1 SNRNP200
SNRNP25 SNRNP27 SNRNP35 SNRNP40 SNRNP48 SNRNP70 SNRPB
SNRPC SNRPE SNRPEL1 SNRPF SNRPG SNRPN SNW1
SON SPEN SPTBN1 SRI SRP14 SRPK3 SRRM2
SRRT SRSF10 SRSF11 SRSF12 SRSF3 SRSF4 SRSF5
SRSF6 SRSF7 SRSF8 SRSF9 SSB SSBP1 SSR3
SSRP1 ST13 STIP1 STOM STON2 STX4 STXBP3
SUB1 SUGP2 SUMO1 SUMO2 SUPT16H SUPT5H SURF4
SYF2 SYNCRIP SYNE1 TAF15 TARDBP TARS TBL2
TCERG1 TCF20 TCOF1 TCP1 TEX10 TEX15 TFAM
TFIP11 TFPI TFRC TGM2 THOC1 THOC2 THOC3
THOC5 THOC6 THOC7 THRAP3 TIMM13 TK1 TKT
TLN1 TMED9 TMEM33 TMTC2 TOP1 TOPORS TOX4
TPM1 TPM3 TPR TRA2A TRA2B TRAP1 TRIM21
TRIM24 TRIM33 TRMT112 TRNAU1AP TTC33 TTC9C TTLL12
TUBA1B TUBB4B TUBB6 TXNL4A TXNL4B U2AF1 U2AF2
U2SURP UBAP2L UBC UBD UBE2L3 UBE2M UBE2N
UNC45A UPF1 UPF3B USP15 USP39 VAPA VASP
VCL VIM VIPAS39 VPS26A VPS28 VPS33B VPS35
VTN WBP11 WBP4 WDR18 WDR25 WDR61 WDR77
WDR83 WIBG WTAP WWOX XAB2 XIRP1 XPC
XPO1 XRCC5 XRCC6 YBX1 YBX3 YES1 YTHDC1
YTHDF2 YWHAB YWHAE YWHAG YWHAH YWHAQ YWHAZ
ZC3H11A ZC3H13 ZC3H14 ZCCHC8 ZCRB1 ZMAT2 ZMAT5
ZNF207 ZNF326 ZRSR2 ZW10 ZYX
Data information
Please see the Gene Interactions Track Manual.