Gene interactions and pathways from curated databases and text-mining
UPF1: top 25 interacting genes (chr19:18942743-18979039)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only UPF1-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-UPF1 interactions     Show top Genes on graph    

Less-frequently mentioned interactions with UPF1, not among the Top 25
Other genes interacting with UPF1. Mouse-over to show number of abstracts or databases. Sorted alphabetically (sort by article count).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

ABHD16A ACD ACSS2 ADAR AFG3L2 AGO1 AGO2
AIMP2 ALB ALDH7A1 ALYREF APC APOA1 ARHGEF17
ARHGEF2 ATAD3B ATM ATP5O ATXN2L AXIN1 BACH1
BANF1 BBS9 BRF1 C14orf166 CAMSAP2 CAMSAP3 CAND1
CASC3 CCAR2 CCDC77 CCNT1 CDC14A CDC42EP1 CDK17
CDK2 CELF2 CKB CLASP2 CNOT6L COPA COPS5
CROCC CSNK1A1 CSNK1D CSNK1E CSNK2B CTNNA1 CTNNB1
CTSL CTU1 CUL3 CUL5 DCP1A DDX17 DDX18
DDX21 DDX39A DDX3X DDX3Y DDX47 DDX5 DDX50
DDX6 DEK DHH DHX15 DHX30 DHX36 DHX9
DIAPH3 DICER1 DIMT1 DLX4 DXO DYNLL2 EBNA1BP2
EDC3 EDC4 EEF1A1 EEF1A1P5 EEF1A2 EEF2 EIF2A
EIF2AK2 EIF2S1 EIF2S2 EIF3A EIF3B EIF3C EIF3E
EIF3F EIF3L EIF4A1 EIF4E EIF4G1 EIF4G2 EIF4G3
ELAVL1 ENKD1 EPRS ERH ERI2 ESR1 ETF1
FAM110B FAM64A FAM83D FAM83H FLG2 FLII FMR1
FN1 FRG1 FUS FXR2 FYTTD1 GEMIN2 GEMIN4
GIPC1 GLA GNB2L1 GNL3 GNPTG GPR98 GRIA4
GSK3B GSPT1 GSPT2 GTF3C1 GTF3C4 H2AFJ H2BFS
HDAC5 HDLBP HERC1 HIRA HIST1H1E HIST1H2AB HIST1H2AC
HIST1H2AD HIST1H2AE HIST1H2AG HIST1H2AH HIST1H2AJ HIST1H2BB HIST1H2BD
HIST1H2BH HIST1H2BJ HIST1H2BK HIST1H2BL HIST1H2BM HIST1H2BN HIST1H2BO
HIST1H4A HIST2H2AA3 HIST2H2AA4 HIST2H2AC HIST2H2BE HIST2H2BF HIST3H2A
HIST3H2BB HLTF HMMR HNRNPA0 HNRNPA1 HNRNPA2B1 HNRNPA3
HNRNPAB HNRNPC HNRNPD HNRNPDL HNRNPF HNRNPH1 HNRNPH3
HNRNPK HNRNPL HNRNPM HNRNPR HNRNPU HNRNPUL1 HPX
HRNR HSD17B4 HSP90AA1 HSP90AB1 HSPA1A HSPB1 IGF2BP1
IGF2BP2 IGF2BP3 IGHG1 IGKC ILF2 ILF3 IMMT
INTS6 IQCB1 IQGAP3 IRS4 ITGA4 KARS KHDRBS1
KHSRP KLHL40 KRT72 LAGE3 LARP1 LARP4 LARP4B
LARS LAS1L LCN2 LGALS3BP LRRFIP2 MAGOH MAP2
MATR3 MCF2L MOCS3 MOV10 MRPL12 MSH6 MYBBP1A
MYH2 NAA38 NADSYN1 NARF NAT10 NBPF8 NCBP2
NCL NDRG1 NEFH NISCH NKRF NMD3 NOL8
NONO NOP56 NPM1 NSUN2 NXF1 OGT OTUD4
P4HB PABPC3 PABPC4 PABPN1 PAK1IP1 PAPD7 PCBP2
PCID2 PCM1 PCMTD2 PDCD7 PDIA6 PDP1 PELP1
PHB PHB2 PHF5A PIK3CA PIK3CB PIK3R1 PIK3R2
PIK3R3 PKM PLEKHB2 PNRC1 PNRC2 POLD1 POLE
POLR1A POLR1C POLR2A POLR2E PPIH PPP2CA PPP2R1A
PRKRA PRPF3 PRPF8 PRRC2C PSMD12 PTBP1 PTBP2
PTBP3 PUF60 PUM1 PYCR2 R3HCC1L RALY RB1CC1
RBM14 RBM4 RBM8A RBMS1 RBMX RBP1 RC3H2
RHOXF2 RNASE3 RNASEL RNPC3 RNPS1 RPL10 RPL11
RPL12 RPL13 RPL13A RPL14 RPL15 RPL17 RPL18
RPL18A RPL19 RPL21 RPL22 RPL23 RPL23A RPL24
RPL26 RPL26L1 RPL27 RPL27A RPL28 RPL29 RPL3
RPL30 RPL31 RPL32 RPL34 RPL35 RPL35A RPL36
RPL37 RPL37A RPL38 RPL39 RPL3L RPL4 RPL5
RPL6 RPL7 RPL7A RPL8 RPL9 RPLP0 RPLP1
RPRD2 RPS10 RPS11 RPS12 RPS13 RPS14 RPS15
RPS15A RPS16 RPS17 RPS18 RPS19 RPS2 RPS20
RPS21 RPS23 RPS24 RPS28 RPS29 RPS3 RPS3A
RPS4X RPS5 RPS6 RPS7 RPS8 RPS9 RRP36
RSL1D1 RTCB RUVBL1 RUVBL2 RYR1 SACS SART3
SCN3A SERBP1 SERPIND1 SETX SF3A1 SF3B1 SF3B2
SF3B3 SFPQ SIRT7 SLBP SLC1A5 SLC25A3 SLC25A4
SLC25A5 SLC25A6 SMARCA4 SMG5 SMG8 SMG9 SNRNP200
SNRNP48 SNRPB SNRPD3 SNRPN SRRM1 SRSF1 SRSF3
SRSF4 SRSF7 STIP1 STOML2 STRAP SUGP2 SUPT16H
SYNE1 TAF15 TARDBP TBL2 TCF20 TCP1 TERT
TEX10 TEX15 TF TMEM33 TMTC2 TMX1 TRIM21
TRIM33 TRMT112 TSG101 TTI1 TTR TUBA1A TUBB
TUBB4B UBC UBD UNC45A URM1 USP47 VIM
VIPAS39 VPS33B VPS35 WDR18 WDR6 WIBG XIRP1
XPC XRCC5 XRCC6 YBX1 YBX3 YWHAB YWHAE
YWHAG YWHAH YWHAQ YWHAZ ZC3HAV1 ZCCHC3 ZMAT5
ZNF326
Data information
Please see the Gene Interactions Track Manual.