Gene interactions and pathways from curated databases and text-mining
XRN1: top 25 interacting genes (chr3:142025448-142166853)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only XRN1-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-XRN1 interactions     Show top Genes on graph    

Less-frequently mentioned interactions with XRN1, not among the Top 25
Other genes interacting with XRN1. Mouse-over to show number of abstracts or databases. Sorted alphabetically (sort by article count).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

AASS ABCB7 ACOT8 ACTL6A AGO2 AKAP8 AKAP8L
ALDH18A1 ALDH1B1 ALDOA AP1G2 ARF4 ARHGEF2 ARL1
ASS1 ATP1A1 ATP2A2 ATP5C1 ATP5J2 BAG6 BCR
BRF1 C1QBP CCAR2 CCT2 CCT3 CCT4 CCT5
CCT6A CCT8 CDK1 CENPBD1 CEPT1 CHD4 CHTF18
COPG1 COPG2 CSE1L CYR61 DCP1A DCP1B DDX1
DDX20 DDX3X DDX52 DDX6 DHH DHX15 DHX32
DIMT1 DNAJA2 DNAJA3 DNAJB6 DPM1 DPP7 DQX1
DXO DYNC1H1 EDC4 EEF1G EFTUD2 EIF2A EIF3E
EIF3I EIF4A1 EIF4E EIF4E1B EIF4ENIF1 EP400 ERCC3
ETFA EXOSC1 EXOSC10 EXOSC2 EXOSC4 EXOSC6 EXOSC8
FANCD2 FBL FBXW7 FBXW8 GANAB GCDH GCN1L1
GSG2 GSPT1 GTF2I GTF3C1 GTF3C2 GTF3C3 GTF3C4
HADHB HDAC1 HDAC2 HEATR1 HELLS HIGD1A HIST1H2BL
HNRNPA0 HNRNPA1 HNRNPK HSPB1 HSPD1 HSPH1 IDH3A
IDH3B IDH3G IGF2BP1 IGF2BP2 IKBKAP ILVBL IPO13
IPO4 IPO7 IPO9 IQGAP2 IQGAP3 IRAK1 IRS4
KIAA0020 KPNA2 KPNA4 KPNB1 LDHA LMNA LONP1
LSM10 MAPKAP1 MAPRE1 MARS MAX MCM7 MKI67IP
MLH1 MMS19 MOGS MRPS22 MRPS34 MSH2 MSH3
MSH6 MYBBP1A MYC MYO5C MYO9A MYO9B NAA38
NCBP2L NCL NDUFA13 NDUFA5 NDUFA8 NDUFS1 NDUFS2
NDUFS3 NEK9 NMD3 NONO NOP56 NOP58 NUP133
NUP153 OAT P4HA1 PABPC4 PATL1 PATL2 PCBP1
PLOD3 POLD1 POLE POLR2A POLR2B PPP1CA PPP6C
PPT1 PRKDC PRPF6 PSMA1 PSMA2 PSMA3 PSMA4
PSMA5 PSMA7 PSMB1 PSMB3 PSMB4 PSMB5 PSMC1
PSMC2 PSMC3 PSMC4 PSMC6 PSMD2 PSMD3 PSMD4
PSME4 PTGES2 PTPN14 RAF1 RANBP2 RBP1 RFC2
RFC3 RFC5 RNASE3 RNASEL RNGTT RNH1 RPP30
RUVBL1 RUVBL2 SARS SEC61A1 SHOC2 SIRT7 SKIV2L
SKIV2L2 SKP1 SLC25A1 SLC25A11 SLC25A12 SLC25A13 SLIT2
SMARCA5 SMARCC1 SMARCD2 SMC2 SMC4 SMG1 SMG5
SMG6 SNRNP200 SNRPD1 SPATA20 SPTLC1 SQRDL SQSTM1
SSR4 STAM2 SUCLG1 TAZ TCP1 TMPO TOP1
TOP2A TRIM28 TRMT1L TRRAP TTC27 TUBA4A TUBG1
TUBGCP2 U2SURP UBC UBE3C UBR2 VWA5B2 WAPAL
WDR77 XPO1 XPO5 XPOT XRCC5 XRCC6 XRN2
YWHAB YWHAQ ZC3HAV1 ZNF121 ZNF281
Data information
Please see the Gene Interactions Track Manual.