Gene interactions and pathways from curated databases and text-mining

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SNRPD1 — U2AF1

Pathways - manually collected, often from reviews:

Protein-Protein interactions - manually collected from original source literature:

Studies that report less than 10 interactions are marked with *

  • IRef Biogrid Interaction: SNRPD1 — U2AF1 (direct interaction, two hybrid) Hegele et al., Mol Cell 2012
  • MIPS CORUM C complex spliceosome: C complex spliceosome complex (AQR-CACTIN-CDC40-CDC5L-CRNKL1-CWC15-CWC22-DDX23-DDX41-DDX5-DGCR14-DHX35-DHX38-DHX8-EFTUD2-EIF4A3-FRG1-GPATCH1-HNRNPA1-HNRNPA2B1-HNRNPA3-HNRNPC-HNRNPF-HNRNPH1-HNRNPK-HNRNPM-HNRNPR-HNRNPU-ISY1-LSM2-LSM3-MAGOH-WDR83-PABPC1-PLRG1-PNN-PPIE-PPIL1-PPIL3-PPWD1-PRPF19-PRPF4B-PRPF6-PRPF8-RALY-RBM22-RBM8A-RBMX-SART1-CWC27-SF3A1-SF3A2-SF3A3-SF3B1-SF3B2-SF3B3-SRSF1-SKIV2L2-SLU7-SNRNP200-SNRNP40-SNRPA1-SNRPB-SNRPB2-SNRPD1-SNRPD2-SNRPD3-SNRPE-SNRPF-SNRPG-SNW1-SRRM1-SRRM2-SYF2-SYNCRIP-TFIP11-ALYREF-U2AF1-XAB2-ZCCHC8) Jurica et al., RNA 2002
  • MIPS CORUM 17S U2 snRNP: 17S U2 snRNP complex (CHERP-DDX46-DHX15-DNAJC8-HMG20B-HSPD1-PHF5A-PUF60-RBM17-SF3A1-SF3A2-SF3A3-SF3B1-SF3B6-SF3B2-SF3B3-SF3B4-SF3B5-SRSF1-SMNDC1-SNRPA1-SNRPB-SNRPB2-SNRPD1-SNRPD2-SNRPD3-SNRPE-SNRPF-SNRPG-U2SURP-TRAP1-U2AF1-U2AF2) Will et al., EMBO J 2002
  • MIPS CORUM Spliceosome: Spliceosome complex (ACIN1-AQR-DDX39B-BCAS2-BUD13-BUD31-CFAP20-CACTIN-C19orf43-CD2BP2-CDC40-CDC5L-CIRBP-CPSF6-CDK12-CRNKL1-LUC7L3-CTNNBL1-CWC15-CWC22-DDX17-DDX23-DDX3X-DDX41-DDX46-DDX5-DGCR14-DHX15-DHX16-DHX38-DHX8-DHX9-DNAJC8-EFTUD2-EIF4A3-PAXBP1-HTATSF1-IGF2BP3-IK-ISY1-KIAA1429-LSM2-LSM3-LSM4-LSM6-LSM7-MAGOH-MFAP1-MOV10-NCBP1-NCBP2-NHP2L1-NUDT21-PABPC1-PLRG1-PPIE-PPIH-PPIL1-PPIL2-PPIL3-PPM1G-PPWD1-PRPF18-PRPF19-PRPF3-PRPF31-PRPF4-PRPF40A-PRPF4B-PRPF6-PRPF8-PUF60-RBM15-RBM17-RBM22-RBM25-RBM39-RBM8A-RNPS1-SART1-SF1-SF3A1-SF3A2-SF3A3-SF3B1-SF3B6-SF3B2-SF3B3-SF3B4-SRSF1-SRSF11-SRSF2-SRSF3-SRSF4-SRSF5-SRSF7-SKIV2L2-SLU7-SMNDC1-SMU1-SNRNP200-SNRNP27-SNRNP40-SNRNP70-SNRPA-SNRPA1-SNRPB-SNRPB2-SNRPC-SNRPD1-SNRPD2-SNRPD3-SNRPE-SNRPF-SNRPG-SNW1-SPEN-U2SURP-SRRM1-SRRM2-SRRT-SRSF6-SRSF9-SYF2-TCERG1-TFIP11-THOC1-THOC2-THOC3-ALYREF-THOC5-THOC6-THOC7-TRA2B-TXNL4A-U2AF1-U2AF2-USP39-WBP11-WTAP-XAB2-ZNF207) Zhou et al., Nature 2002
  • IRef Corum Interaction: Complex of 161 proteins (association, pull down) Jurica et al., RNA 2002
  • IRef Corum Interaction: Complex of 427 proteins (association, molecular sieving) Zhou et al., Nature 2002
  • IRef Corum Interaction: Complex of 34 proteins (association, coimmunoprecipitation) Will et al., EMBO J 2002
  • IRef Intact Interaction: Complex of 117 proteins (association, tandem affinity purification) Zhao et al., Journal of proteomics 2011
  • IRef Intact Interaction: Complex of 53 proteins (association, tandem affinity purification) Varjosalo et al., Cell reports 2013
  • IRef Intact Interaction: SNRPD1 — U2AF1 (physical association, two hybrid) Hegele et al., Mol Cell 2012
  • IRef Intact Interaction: Complex of 55 proteins (association, tandem affinity purification) Varjosalo et al., Cell reports 2013