Skip to main content UCSC Genome Browser on Human (GRCh38/hg38)
Move Zoom in Zoom out
chr19:47,800,549-47,864,712 64,164 bp.
  
-   Visible Tracks  
Early_Progenitors_VIP_Score
human_retina_Early_Progenitors_snATAC
Late_Progenitors_VIP_Score
Summedneg_AC_HC_GC_precursors_Allpeaks_plusRPE
Summedneg_Developing_Amacrines_Allpeaks_plusRPE
Summedneg_Developing_Bipolars_Allpeaks_plusRPE
Summedneg_Developing_Cones_Allpeaks_plusRPE
Summedneg_Developing_Ganglions_Allpeaks_plusRPE
Summedneg_Developing_Horizontals_Allpeaks_plusRPE
Summedneg_Developing_Rods_Allpeaks_plusRPE
Summedneg_Ganglion_Precursors_Allpeaks_plusRPE
Summedneg_Macular_RPE_Allpeaks_RPE_cat
Summedneg_Mature_Amacrines_Allpeaks_plusRPE
Summedneg_Mature_Bipolars_Allpeaks_plusRPE
Summedneg_Mature_Cones_Allpeaks_plusRPE
Summedneg_Mature_Horizontals_Allpeaks_plusRPE
Summedneg_Mature_Mullers_Allpeaks_plusRPE
Summedneg_Mature_Rods_Allpeaks_plusRPE
human_retina_Late_Progenitors_snATAC
human_retina_Ganglion_Precursors_snATAC
human_retina_Developing_Cones_snATAC
human_retina_Developing_Rods_snATAC
human_retina_Developing_Horizontals_snATAC
human_retina_Developing_Bipolars_snATAC
human_retina_Developing_Amacrines_snATAC
human_retina_Developing_Ganglions_snATAC
human_retina_AC_HC_GC_Precursors_snATAC
human_retina_Mature_Cones_snATAC
human_retina_Mature_Rods_snATAC
human_retina_Mature_Horizontals_snATAC
human_retina_Mature_Bipolars_snATAC
human_retina_Mature_Mullers_snATAC
human_retina_Mature_Amacrines_snATAC
human_retina_Early_Primary_Progenitors_snRNA_fwd
human_retina_Early_Primary_Progenitors_snRNA_rev
human_retina_Cycling_progenitors_snRNA_fwd
human_retina_Cycling_progenitors_snRNA_rev
human_retina_Transitional_1_snRNA_fwd
human_retina_Transitional_1_snRNA_rev
human_retina_bipolar_photoreceptor_cell_precursors_snRNA_fwd
human_retina_bipolar_photoreceptor_cell_precursors_snRNA_rev
human_retina_Cones_snRNA_fwd
human_retina_Cones_snRNA_rev
human_retina_Rods_snRNA_fwd
human_retina_Rods_snRNA_rev
human_retina_Horizontals_snRNA_fwd
human_retina_Horizontals_snRNA_rev
human_retina_Bipolars_snRNA_fwd
human_retina_Bipolars_snRNA_rev
human_retina_Mullers_snRNA_fwd
human_retina_Mullers_snRNA_rev
human_retina_Amacrines_snRNA_fwd
human_retina_Amacrines_snRNA_rev
human_retina_Ganglions_snRNA_fwd
human_retina_Ganglions_snRNA_rev
human_retina_Astrocytes_snRNA_fwd
human_retina_Astrocytes_snRNA_rev
GENCODE V50
NCBI RefSeq
UCSC 100 Vertebrates
-   Custom Tracks  
Early_Progenitors_VIP_Score
human_retina_Early_Progenitors_snATAC
Late_Progenitors_VIP_Score
Summedneg_AC_HC_GC_precursors_Allpeaks_plusRPE
Summedneg_Developing_Amacrines_Allpeaks_plusRPE
Summedneg_Developing_Bipolars_Allpeaks_plusRPE
Summedneg_Developing_Cones_Allpeaks_plusRPE
Summedneg_Developing_Ganglions_Allpeaks_plusRPE
Summedneg_Developing_Horizontals_Allpeaks_plusRPE
Summedneg_Developing_Rods_Allpeaks_plusRPE
Summedneg_Ganglion_Precursors_Allpeaks_plusRPE
Summedneg_Macular_RPE_Allpeaks_RPE_cat
Summedneg_Mature_Amacrines_Allpeaks_plusRPE
Summedneg_Mature_Bipolars_Allpeaks_plusRPE
Summedneg_Mature_Cones_Allpeaks_plusRPE
Summedneg_Mature_Horizontals_Allpeaks_plusRPE
Summedneg_Mature_Mullers_Allpeaks_plusRPE
Summedneg_Mature_Rods_Allpeaks_plusRPE
human_retina_Late_Progenitors_snATAC
human_retina_Ganglion_Precursors_snATAC
human_retina_Photoreceptor_Bipolar_Precursors_snATAC
human_retina_Developing_Cones_snATAC
human_retina_Developing_Rods_snATAC
human_retina_Developing_Horizontals_snATAC
human_retina_Developing_Bipolars_snATAC
human_retina_Developing_Amacrines_snATAC
human_retina_Developing_Ganglions_snATAC
human_retina_AC_HC_GC_Precursors_snATAC
human_retina_Mature_Cones_snATAC
human_retina_Mature_Rods_snATAC
human_retina_Mature_Horizontals_snATAC
human_retina_Mature_Bipolars_snATAC
human_retina_Mature_Mullers_snATAC
human_retina_Mature_Amacrines_snATAC
human_retina_Mature_Ganglions_snATAC
human_retina_Early_Primary_Progenitors_snRNA_fwd
human_retina_Early_Primary_Progenitors_snRNA_rev
human_retina_Cycling_progenitors_snRNA_fwd
human_retina_Cycling_progenitors_snRNA_rev
human_retina_Transitional_1_snRNA_fwd
human_retina_Transitional_1_snRNA_rev
human_retina_bipolar_photoreceptor_cell_precursors_snRNA_fwd
human_retina_bipolar_photoreceptor_cell_precursors_snRNA_rev
human_retina_Cones_snRNA_fwd
human_retina_Cones_snRNA_rev
human_retina_Rods_snRNA_fwd
human_retina_Rods_snRNA_rev
human_retina_Horizontals_snRNA_fwd
human_retina_Horizontals_snRNA_rev
human_retina_Bipolars_snRNA_fwd
human_retina_Bipolars_snRNA_rev
human_retina_Mullers_snRNA_fwd
human_retina_Mullers_snRNA_rev
human_retina_Amacrines_snRNA_fwd
human_retina_Amacrines_snRNA_rev
human_retina_Ganglions_snRNA_fwd
human_retina_Ganglions_snRNA_rev
human_retina_Astrocytes_snRNA_fwd
human_retina_Astrocytes_snRNA_rev
human_retina_Microglia_snRNA_fwd
human_retina_Microglia_snRNA_rev
-   Mapping and Sequencing  
Base Position
Assembly
Assembly Tracks
Centromeres
Chromosome Band
Clone Ends
Exome Probesets
Gap
GC Percent
GRC Incident
p14 GRC Patches
Hg19 Diff
INSDC
LiftOver & ReMap
LRG Regions
Mappability
Problematic Regions
Recomb Rate
RefSeq Acc
Restr Enzymes
Short Match
-   Genes and Gene Predictions  
GENCODE V50
NCBI RefSeq
CCDS
CRISPR Targets
GENCODE Archive
GENCODE Versions
HGNC
IKMC Genes Mapped
LRG Transcripts
MANE
MGC/ORFeome Genes
NMD Escape
Non-canonical ORFs
Non-coding RNA
Other RefSeq
Pfam in GENCODE
Prediction Archive
Pseudogenes
RetroGenes V9
TransMap V5
UCSC Alt Events
UniProt
-   Phenotypes, Variants, and Literature  
OMIM
AlphaMissense
CADD 1.6
CADD 1.7
Cancer Gene Expr
CIViC
ClinGen
ClinGen CNVs
ClinVar Variants
Constraint scores
Coriell CNVs
COSMIC
COSMIC Regions
COVID Data
DECIPHER
updated Deleteriousness Predictions
Development Delay
Dosage Sensitivity
G2P Project
GenCC
Gene Interactions
GeneReviews
GWAS Catalog
HGMD Public 2025
LOVD Variants
MITOMAP
[No data-chr19]
Orphanet
PanelApp
REVEL Scores
SNPedia
Splicing Impact
TCGA Pan-Cancer
UniProt Variants
Variants in Papers
-   Variation  
dbSNP 155
1000 Genomes
Ancient Hominids
Array Probesets
dbSNP Archive
dbVar Struct Var
DGV Struct Var
Genome In a Bottle
updated gnomAD
new Long-read SVs
new Mobile Element Insertions
Phased Variants
Platinum Genomes
new SNV Frequencies
Tandem Repeat Variation
-   Human Pangenome - HPRC  
Multiple Alignment
Pairwise Alignments
Rearrangements
Short Variants
-   RNA and Transcriptome  
Human ESTs
Human mRNAs
Long-read Transcripts
Other ESTs
Other mRNAs
PRO-cap
ProCapNet
recount3
SIB Alt-Splicing
Spliced ESTs
-   Expression  
GTEx Gene V8
GTEx RNA-Seq Coverage
Affy Archive
EPDnew Promoters
GNF Atlas 2
GTEx Gene
GTEx Transcript
GWIPS-viz Riboseq
MaveDB Experiments
miRNA Tissue Atlas
Single Cell Expression
-   Single Cell RNA-seq  
Blood (PBMC) Hao
Colon Wang
Cortex Velmeshev
Cross Tissue Nuclei
Fetal Gene Atlas
Heart Cell Atlas
Ileum Wang
Kidney Stewart
Liver MacParland
Lung Travaglini
Muscle De Micheli
Pancreas Baron
Placenta Vento-Tormo
Rectum Wang
Skin Sole-Boldo
Tabula Sapiens
-   Regulation  
ENCODE cCREs
new ENCODE4 Regulation
ENCODE3 Regulation
new Fiber-seq
DNA Methylation
CpG Islands
new Episignatures
FANTOM5
GeneHancer
GTEx cis-eQTLs
Hi-C and Micro-C
JASPAR Transcription Factors
MPRAs
ORegAnno
RefSeq Func Elems
ReMap ChIP-seq
VISTA Enhancers
-   Comparative Genomics  
UCSC 100 Vertebrates
Zoonomia 241 Placent
UCSC 30 Primates
Primate Chain/Net
Placental Chain/Net
Vertebrate Chain/Net
CHM13 alignments
Hiller Lab 470 Mammals
Unusually Conserved
Zoonomia+Primates 447
-   Repeats  
RepeatMasker
Interrupted Rpts
Microsatellite
NuMTs Sequence
RepeatMasker Viz.
Segmental Dups
Self Alignment
Simple Repeats
WM + SDust
Invisible link