UCSC Genome Browser on Zebrafish Sep. 2014 (GRCz10/danRer10) Assembly
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chr19:2,307,352-2,489,511 182,160 bp.
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-   Custom Tracks
User Track
-   ZebrafishGenomics
All Targets
GA Targets
GG Targets
NHGRI-1 Invariant
NHGRI-1 Nonsense
NHGRI-1 Variants
ZF_carp_phastcons
ZF_carp_phastcons_CNE
-   All RNASeq FoxD3 Data Jan 2016
Epiboly_Citrine_35_zv10
Epiboly_CitrineCherry_41_zv10
Epiboly_Citrine_52_zv10
Epiboly_CitrineCherry_36_zv10
NCC_5-7ss_E1_Citrine_zv10
NCC_5-7ss_E1_CitrineCherry_zv10
NCC_5-7ss_E3_Citrine_zv10
NCC_5-7ss_E3_CitrineCherry_zv10
NCC_5-7ss_E5_Citrine_zv10
NCC_5-7ss_E5_CitrineCherry_zv10
NCC_5-7ss_Old_Negatives1_zv10
NCC_5-7ss_Old_Negatives2_zv10
NCC_14ss_L2_Citrine_zv10
NCC_14ss_L2_CitrineCherry_zv10
NCC_14ss_L3_Citrine_zv10
NCC_14ss_L3_CitrineCherry_zv10
NCC_14ss_L6_Citrine_zv10
NCC_14ss_L6_CitrineCherry_zv10
-   FoxD3 Smo ATACSeq
smo_ATAC_5-6ss_Jul15_Citrine-Cherry1_zv10
smo_ATAC_5-6ss_Jul15_Citrine-Cherry2_zv10
smo_ATAC_5-6ss_Jul15_Citrine1_zv10
smo_ATAC_5-6ss_Jul15_Citrine2_zv10
smo_ATAC_BioTag_Sox10_V2.2_zv10
smo_ATAC_BioTag_Sox10_V2.5_zv10
smo_ATAC_Bud_Head_Citrine-Cherry1_zv10
smo_ATAC_Bud_Head_Citrine-Cherry2_zv10
smo_ATAC_Bud_Head_Citrine1_zv10
smo_ATAC_Bud_Head_Citrine2_zv10
smo_ATAC_Bud_Tail_Citrine-Cherry1_zv10
smo_ATAC_Bud_Tail_Citrine-Cherry2_zv10
smo_ATAC_Bud_Tail_Citrine1_zv10
smo_ATAC_Bud_Tail_Citrine2_zv10
smo_ATAC_Bud_Whole_Embryo1_zv10
smo_ATAC_Bud_Whole_Embryo_Citrine-Cherry2_zv10
smo_ATAC_Epiboly_ATAC_Citrine_A_zv10
smo_ATAC_Epiboly_ATAC_Citrine_B_zv10
smo_ATAC_Epiboly_Citrine-Cherry_B_zv10
smo_ATAC_Rx_5-6ss_Citrine-Cherry_28_zv10
smo_ATAC_Rx_5-6ss_Citrine18_zv10
smo_ATAC_Rx_5-6ss_Citrine34_zv10
smo_ATAC_Rx_5-6ss_Citrine_Cherry_15_zv10
smo_Epiboly_ATAC_Citrine-Cherry_A_zv10
-   Parsed Rx
Citrine18_Rx_zv10.macs2pileup
Citrine_34_Rx_zv10.macs2pileup
Citrine_Cherry_15_Rx_zv10.macs2pileup.
Citrine_Cherry_28_Rx_zv10.macs2pileup
Rx_Citrine18_zv10
Rx_Citrine_34_zv10
Rx_Citrine_Cherry15_zv10
Rx_Citrine_Cherry_28_zv10
-   Mapping and Sequencing
Base Position
Assembly
Gap
GC Percent
GRC Incident
INSDC
RefSeq Acc
Restr Enzymes
Short Match
-   Genes and Gene Predictions
updated NCBI RefSeq
Other RefSeq
AUGUSTUS
Ensembl Genes
Genscan Genes
TransMap V5...
UniProt
ZGC Genes
-   mRNA and EST
Zebrafish mRNAs
Spliced ESTs
Other mRNAs
Zebrafish ESTs
-   Expression and Regulation
CpG Islands...
-   Comparative Genomics
Turkey Chain/Net
Chicken Chain/Net
Rat Chain/Net
Human Chain/Net
-   Variation and Repeats
RepeatMasker
Interrupted Rpts
Microsatellite
Simple Repeats
UniProt Variants
WM + SDust