UCSC Genome Browser on Mouse July 2007 (NCBI37/mm9) Assembly
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chr1:1-197,195,432 197,195,432 bp.
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-   Custom Tracks
bamCoverage chr1-H3K27ac data 38
bamCoverage chr1-H3K27me3 data 39
bamCoverage chr1-H3K36me3 data 44
bamCoverage chr1-H3K4me1 data 43
bamCoverage chr1-H3K4me3 data 45
bamCoverage chr1-H3K9ac data 42
bamCoverage chr1-H3K9me3 data 40
bamCoverage H3K27ac data 22
bamCoverage H3K27ac-chrY data 64
bamCoverage H3K27ac_chr3 data 56
bamCoverage H3K27me3 data 26
bamCoverage H3K27me3-chrY data 65
bamCoverage H3K27me3_chr3n data 57
bamCoverage H3K36ac data 34
bamCoverage H3K36ac-chr1 data 41
bamCoverage H3K36ac-chr3 data 59
bamCoverage H3K36ac-chrY data 66
bamCoverage H3K36me3 data 29
bamCoverage H3K36me3-chr3 data 60
bamCoverage H3K36me3-chrY data 67
bamCoverage H3K4me1 data 24
bamCoverage H3K4me1-chrY data 75
bamCoverage H3K4me1_ data 58
bamCoverage H3K4me3 data 36
bamCoverage H3K4me3-chr3 data 62
bamCoverage H3K4me3-chrY data 77
bamCoverage H3K9ac data 28
bamCoverage H3K9ac-chr3 data 61
bamCoverage H3K9ac-chrY data 78
bamCoverage H3K9me3 data 27
bamCoverage H3K9me3-chr3 data 63
bamCoverage H3K9me3-chrY data 79
bamCoverage HBx-chr15 data 2
bamCoverage HBx-chrY data 4
bamCoverage HBx_chr1 data 16
bamCoverage HBx_chr3 data 1
bamCoverage Pol2-chr1 data 9
bamCoverage Pol2-chr15 data 6
bamCoverage Pol2-chr3 data 11
bamCoverage Pol2-chrY data 12
bigwigCompare chr15-HBx_Pol2 data 8 and data 5
-   Mapping and Sequencing
Base Position
STS Markers
Assembly
BAC End Pairs
Chromosome Band
Gap
GC Percent
GRC Incident
Map Contigs
Mappability
MGI QTL
Restr Enzymes
Short Match
-   Genes and Gene Predictions
UCSC Genes
updated Ensembl Genes
Human Proteins
RefSeq Genes
Other RefSeq
AceView Genes
AUGUSTUS
CCDS
CRISPR...
Exoniphy
Gene Trap
Geneid Genes
Genscan Genes
IKMC Genes
MGC Genes
miRNA
N-SCAN
NIA Gene Index
Old UCSC Genes
ORFeome Clones
Pfam in UCSC Gene
SGP Genes
Transcriptome
tRNA Genes
UCSC Alt Events
Vega Genes
Yale Pseudo60
-   Literature
Publications
Web Sequences
-   mRNA and EST
Spliced ESTs
Mouse mRNAs
Mouse ESTs
Other mRNAs
PolyA-Seq
SIB Alt-Splicing
-   Phenotype and Allele
MGI Allele
MGI Gene Trap
MGI Phenotype
MGI RepTranscrpt
-   Expression and Regulation
Affy Exon...
Affy GNF1M
Affy MOE430
Affy U74
Allen Brain
Caltech Histone
Caltech RNA-seq
Caltech TFBS
CpG Islands...
CSHL Long RNA-seq
FaceBase 24STypes
FSU Repli-chip
GNF Atlas 2
GNF U74A
GNF U74B
GNF U74C
LICR Histone
LICR RNA-seq
LICR TFBS
NHGRI BiP
NKI Nuc Lamina...
ORegAnno
PSU DNaseI HS
PSU Histone
PSU RNA-seq
PSU TFBS
REST
Stan/Yale Histone
Stan/Yale RNA-seq
Stan/Yale TFBS
TS miRNA sites
UW DNaseI DGF
UW DNaseI HS
UW RNA-seq
-   Comparative Genomics
Conservation
GERP
Rat Chain/Net
Guinea pig Chain/Net
Rabbit Chain/Net
Marmoset Chain/Net
Rhesus Chain/Net
Orangutan Chain/Net
Chimp Chain/Net
Human Chain/Net
Panda Chain/Net
Dog Chain/Net
Cat Chain/Net
Horse Chain/Net
Sheep Chain/Net
bosTau6 Chain/Net
Pig Chain/Net
Elephant Chain/Net
Opossum Chain/Net
Platypus Chain/Net
Lizard Chain/Net
Turkey Chain/Net
Chicken Chain/Net
X. tropicalis Chain/Net
Zebrafish Chain/Net
Stickleback Chain/Net
Medaka Chain/Net
Fugu Chain/Net
Tetraodon Chain/Net
Lamprey Chain/Net
Lancelet Chain/Net
-   Variation and Repeats
SNPs (128)
RepeatMasker
Agilent CGH
Microsatellite
NumtS Sequence
Segmental Dups
Simple Repeats