UCSC Genome Browser on D. melanogaster Aug. 2014 (BDGP Release 6 + ISO1 MT/dm6) Assembly
move zoom in zoom out
chr3L:1,309,984-1,316,895 6,912 bp.
move start
  Click on a feature for details. Click+shift+drag to zoom in. Click side bars for track options. Drag side bars or labels up or down to reorder tracks. Drag tracks left or right to new position. Press "?" for keyboard shortcuts.   move end
  
Use drop-down controls below and press refresh to alter tracks displayed.
Tracks with lots of items will automatically be displayed in more compact modes.
-   Custom Tracks
Assembled Sequence
Duplication Loci
Pabcio Reads
RT-PCR results
-   Sequencing depth across six DGRP lines
RAL_208
RAL_379
RAL_399
RAL_427
RAL_517
RAL_799
-   RNA-seq data across six DGRP lines
208-A1
208-A2
208-FFB1
208-FFB2
208-H1
208-H2
208-M1
208-M2
208-MFB1
208-MFB2
208-O1
208-O2
208-T1
208-T2
379-A1
379-A2
379-FFB1
379-FFB2
379-H1
379-H2
379-M1
379-M2
379-MFB1
379-MFB2
379-O1
379-O2
379-T1
379-T2
399-A1
399-A2
399-FFB1
399-FFB2
399-H1
399-H2
399-M1
399-M2
399-MFB1
399-MFB2
399-O1
399-O2
399-T1
399-T2
427-A1
427-A2
427-FFB1
427-FFB2
427-H1
427-H2
427-M1
427-M2
427-MFB1
427-MFB2
427-O1
427-O2
427-T1
427-T2
517-A1
517-A2
517-FFB1
517-FFB2
517-H1
517-H2
517-M1
517-M2
517-MFB1
517-MFB2
517-O1
517-O2
517-T1
517-T2
799-A1
799-A2
799-FFB1
799-FFB2
799-H1
799-H2
799-M1
799-M2
799-MFB1
799-MFB2
799-O1
799-O2
799-T1
799-T2
-   Mapping and Sequencing
Base Position
Chromosome Band
Assembly
Gap
GC Percent
INSDC
RefSeq Acc
Restr Enzymes
Short Match
-   Genes and Gene Predictions
NCBI RefSeq
AUGUSTUS
CRISPR
updated Ensembl Genes
Genscan Genes
Other RefSeq
Pfam in RefSeq
UniProt
-   mRNA and EST
Spliced ESTs
D. melanogaster ESTs
D. melanogaster mRNAs
Other mRNAs
-   Expression and Regulation
CpG Islands
ORegAnno
-   Comparative Genomics
Conservation
Cons 124 Insects
Insects Chain/Net
-   Variation and Repeats
Interrupted Rpts
Microsatellite
Simple Repeats
UniProt Variants
WM + SDust
RepeatMasker