Gene interactions and pathways from curated databases and text-mining
J Biol Chem 2005, PMID: 15613478

Actinomycin D induces histone gamma-H2AX foci and complex formation of gamma-H2AX with Ku70 and nuclear DNA helicase II.

Mischo, Hannah Elisabeth; Hemmerich, Peter; Grosse, Frank; Zhang, Suisheng

Formation of gamma-H2AX foci is a P. O.cellular response to genotoxic stress, such as DNA double strand breaks or stalled replication forks. Here we show that gamma-H2AX foci were also formed when cells were incubated with 0.5 microg/ml DNA intercalating agent actinomycin D. In untreated cells, gamma-H2AX co-immunoprecipitated with Ku70, a subunit of DNA-dependent protein kinase, as well as with nuclear DNA helicase II (NDH II), a DEXH family helicase also known as RNA helicase A or DHX9. This association was increased manifold after actinomycin D treatment. DNA degradation diminished the amount of Ku70 associated with gamma-H2AX but not that of NDH II. In vitro binding studies with recombinant NDH II and H2AX phosphorylated by DNA-dependent protein kinase confirmed a direct physical interaction between NDH II and gamma-H2AX. Thereby, the NDH II DEXH domain alone, i.e. its catalytic core, was able to support binding to gamma-H2AX. Congruently, after actinomycin D treatment, NDH II accumulated in RNA-containing nuclear bodies that predominantly co-localized with gamma-H2AX foci. Taken together, these results suggest that histone gamma-H2AX promotes binding of NDH II to transcriptionally stalled sites on chromosomal DNA.

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Text Mining Data

NDH II → gamma-H2AX: " Taken together, these results suggest that histone gamma-H2AX promotes binding of NDH II to transcriptionally stalled sites on chromosomal DNA "

Manually curated Databases

  • IRef Biogrid Interaction: H2AFX — DHX9 (physical association, affinity chromatography technology)
  • IRef Biogrid Interaction: H2AFX — DHX9 (direct interaction, pull down)
  • IRef Biogrid Interaction: H2AFX — POLR2A (physical association, affinity chromatography technology)
  • IRef Biogrid Interaction: DHX9 — PRKDC (physical association, affinity chromatography technology)
  • IRef Biogrid Interaction: DHX9 — PRKDC (direct interaction, enzymatic study)
  • IRef Biogrid Interaction: DHX9 — PRKDC (colocalization, biochemical)
  • IRef Biogrid Interaction: XRCC6 — H2AFX (physical association, affinity chromatography technology)
  • IRef Biogrid Interaction: H2AFX — PRKDC (direct interaction, enzymatic study)
  • MIPS CORUM GammaH2AFX-NDHII-Ku70-DNA complex: GammaH2AFX-NDHII-Ku70-DNA complex complex (DHX9-H2AFX-XRCC6)
  • IRef Corum Interaction: Complex of DHX9-H2AFX-XRCC6 (association, anti bait coimmunoprecipitation)
  • MIPS Negatome - no physical interaction between proteins Interaction: XRCC6 — H2AFX (Absence of interaction, anti bait coimmunoprecipitation)
In total, 6 gene pairs are associated to this article in curated databases